X-ray micro-tomography for investigations of brain tissues on cellular level

被引:0
|
作者
Khimchenko, Anna [1 ]
Schulz, Georg [1 ]
Deyhle, Hans [1 ]
Thalmann, Peter [1 ]
Zanette, Irene [2 ]
Zdora, Marie-Christine [2 ,3 ]
Bikis, Christos [1 ]
Hipp, Alexander [4 ]
Hieber, Simone E. [1 ]
Schweighauser, Gabriel [5 ]
Hench, Juergen [5 ]
Mueller, Bert [1 ]
机构
[1] Univ Basel, Biomat Sci Ctr, Dept Biomed Engn, Gewerbestrasse 14, CH-4123 Allschwil, Switzerland
[2] Diamond Light Source Ltd, Diamond House, Didcot OX11 0DE, Oxon, England
[3] UCL, Dept Phys & Astron, Gower St, London WC1E 6BT, England
[4] Helmholtz Zentrum Geesthacht, Max Planck Strasse 1, D-21502 Geesthacht, Germany
[5] Univ Basel Hosp, Inst Pathol, Dept Neuropathol, Schonbeinstrasse 40, CH-4056 Basel, Switzerland
来源
关键词
X-ray micro-tomography; phase contrast; absorption contrast; grating interferometry; synchrotron radiation; brain tissue; cerebellum; PHASE-CONTRAST; COMPUTED-TOMOGRAPHY; QUANTIFICATION; RECONSTRUCTION; REGISTRATION; METAL;
D O I
10.1117/12.2237554
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
X-ray imaging in absorption contrast mode is well established for hard tissue visualization. However, performance for lower density materials is limited due to a reduced contrast. Our aim is three-dimensional (3D) characterization of micro-morphology of human brain tissues down to (sub-) cellular resolution within a laboratory environment. Using the laboratory-based microtomography (mu CT) system nanotom (R) m (GE Sensing & Inspection Technologies GmbH, Wunstorf, Germany) and synchrotron radiation at the Diamond-Manchester Imaging Branchline I13-2 (Diamond Light Source, Didcot, UK), we have acquired 3D data with a resolution down to 0.45 mu m for visualization of a human cerebellum specimen down to cellular level. We have shown that all selected modalities, namely laboratory-based absorption contrast micro-tomography (LB mu CT), synchrotron radiation based in-line single distance phase contrast tomography (SDPR) and synchrotron radiation based single-grating interferometry (GI), can reach cellular resolution for tissue samples with a size in the mm-range. The results are discussed qualitatively in comparison to optical microscopy of haematoxylin and eosin (H&E) stained sections. As phase contrast yields to a better data quality for soft tissues and in order to overcome restrictions of limited beamline access for phase contrast measurements, we have equipped the mu CT system nanotom (R) m with a double-grating phase contrast set-up. Preliminary experimental results of a knee sample consisting of a bony part and a cartilage demonstrate that phase contrast data exhibits better quality compared to absorption contrast. Currently, the set-up is under adjustment. It is expected that cellular resolution would also be achieved. The questions arise (1) what would be the quality gain of laboratory-based phase contrast in comparison to laboratory-based absorption contrast tomography and (2) could laboratory-based phase contrast data provide comparable results to synchrotron radiation based phase contrast data.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] High Temperature X-Ray Micro-Tomography
    MacDowell, Alastair A.
    Barnard, Harold
    Parkinson, Dilworth Y.
    Haboub, Abdel
    Larson, Natalie
    Zok, Frank
    Parerai, Francesco
    Mansour, Nagi N.
    Bale, Hrishikesh
    Gludovatz, Bernd
    Acevedo, Claire
    Liu, Dong
    Ritchie, Robert O.
    PROCEEDINGS OF THE 12TH INTERNATIONAL CONFERENCE ON SYNCHROTRON RADIATION INSTRUMENTATION (SRI2015), 2016, 1741
  • [2] MICRO-TOMOGRAPHY AND X-RAY ANALYSIS OF GEOLOGICAL SAMPLES
    Gruia, Ion
    PROCEEDINGS OF THE ROMANIAN ACADEMY SERIES A-MATHEMATICS PHYSICS TECHNICAL SCIENCES INFORMATION SCIENCE, 2017, 18 (01): : 42 - 49
  • [3] PERCIVAL: possible applications in X-ray micro-tomography
    Pinaroli, G.
    Lautizi, G.
    Donato, S.
    Stebel, L.
    Cautero, G.
    Giuressi, D.
    Gregori, I.
    Dal Zilio, S.
    Sergo, R.
    Scarcia, M.
    Cudin, I.
    Wunderer, C. B.
    Correa, J.
    Marras, A.
    Aplin, S.
    Boitrelle, B.
    Orsini, F.
    Goettlicher, P.
    Kuhn, M.
    Lange, S.
    Niemann, M.
    Shevyakov, I.
    Zimmer, M.
    Guerrini, N.
    Marsh, B.
    Sedgwick, I.
    Greer, A.
    Nicholls, T.
    Pedersen, U. K.
    Tartoni, N.
    Hyun, H.
    Kim, K.
    Rah, S.
    Graafsma, H.
    Menk, R. H.
    JOURNAL OF INSTRUMENTATION, 2020, 15 (02):
  • [4] X-ray micro-Tomography at the Advanced Light Source
    MacDowell, A. A.
    Parkinson, D. Y.
    Haboub, A.
    Schaible, E.
    Nasiatka, J. R.
    Yee, C. A.
    Jameson, J. R.
    Ajo-Franklin, J. B.
    Brodersen, C. R.
    McElrone, A. J.
    DEVELOPMENTS IN X-RAY TOMOGRAPHY VIII, 2012, 8506
  • [5] Cold neutron and monochromatic X-ray micro-tomography
    Masschaele, B
    Baechler, S
    Cauwels, P
    Jolie, J
    Mondelaers, W
    Dierick, M
    APPLICATION OF ACCELERATORS IN RESEARCH AND INDUSTRY, 2001, 576 : 1095 - 1098
  • [6] Determining the Cellular Structure of Two Cereal Food Foams by X-ray Micro-Tomography
    Sylvie Chevallier
    Anne-Laure Réguerre
    Alain Le Bail
    Guy Della Valle
    Food Biophysics, 2014, 9 : 219 - 228
  • [7] Determining the Cellular Structure of Two Cereal Food Foams by X-ray Micro-Tomography
    Chevallier, Sylvie
    Reguerre, Anne-Laure
    Le Bail, Alain
    Della Valle, Guy
    FOOD BIOPHYSICS, 2014, 9 (03) : 219 - 228
  • [8] X-ray fluorescence micro-tomography and laminography using an x-ray scanning microscope
    Watanabe, N.
    Hoshinol, M.
    Yamamoto, K.
    Aoki, S.
    Takeuchi, A.
    Suzuki, Y.
    9TH INTERNATIONAL CONFERENCE ON X-RAY MICROSCOPY, 2009, 186
  • [9] X-ray computed micro-tomography of reticulated vitreous carbon
    Arenas, Luis F.
    Boardman, Richard P.
    de Leon, Carlos Ponce
    Walsh, Frank C.
    CARBON, 2018, 135 : 85 - 94
  • [10] X-ray micro-tomography applications of relevance to the petroleum industry
    Knackstedt, Mark A.
    Arns, Christoph H.
    Sakellariou, Arthur
    Senden, Tim J.
    Sheppard, Adrian P.
    Sok, Rob M.
    PORTABLE SYNCHROTRON LIGHT SOURCES AND ADVANCED APPLICATIONS, 2007, 902 : 135 - +