Studying Amphiphilic Self-assembly with Soft Coarse-Grained Models

被引:109
|
作者
Mueller, Marcus [1 ]
机构
[1] Univ Gottingen, Inst Theoret Phys, D-37077 Gottingen, Germany
关键词
Computer simulation; Self-consistent field theory; Block copolymers; MONTE-CARLO SIMULATIONS; MOLECULAR-DYNAMICS SIMULATION; DISSIPATIVE PARTICLE DYNAMICS; DENSITY-FUNCTIONAL THEORY; BLOCK-COPOLYMER MELTS; LINEAR POLYMER MELTS; SLIP-LINK MODEL; ABC TRIBLOCK COPOLYMERS; MEAN-FIELD SIMULATIONS; MICROPHASE SEPARATION;
D O I
10.1007/s10955-011-0302-z
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Highly coarse-grained models for investigating the self-assembly of lipids and copolymer materials are discussed. Soft interactions between segments that represent many atoms naturally arise in the course of systematic coarse-graining, and they are necessary for modeling fluctuation effects whose strengths is dictated by a large invariant degree of polymerization. The soft non-bonded interactions of the coarse-grained models are related to the excess free-energy functional of an equivalent field-theoretic description. The connection between the particle-based model and the field-theoretic description helps to identify the physical significance of the model interactions. Non-bonded interactions, which describe the complex phase behavior of compressible mixtures or include local fluid-like packing effects of the coarse-grained segments, can be systematically constructed based on liquid-state theory or classical density functional theory. Details of the computational implementation and limitations of soft coarse-grained models are discussed. Two computational techniques-field-theoretic force-matching and umbrella sampling-are devised for computing a free-energy functional from a particle-based description. They can be employed to (i) derive the non-bonded free-energy functional of a soft coarse-grained model from a more detailed computational model or to (ii) derive a field-theoretic description from a particle-based model. Moreover, different strategies for accurately calculating free energies of self-assembled systems are described and selected applications presented.
引用
收藏
页码:967 / 1016
页数:50
相关论文
共 50 条
  • [1] Studying Amphiphilic Self-assembly with Soft Coarse-Grained Models
    Marcus Müller
    Journal of Statistical Physics, 2011, 145 : 967 - 1016
  • [2] Coarse-grained simulation of amphiphilic self-assembly
    Michel, David J.
    Cleaver, Douglas J.
    JOURNAL OF CHEMICAL PHYSICS, 2007, 126 (03):
  • [3] Development of a coarse-grained model of polypeptoids for studying self-assembly in solution
    Du, Pu
    Kumar, Revati
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2017, 253
  • [4] Development of a coarse-grained model of polypeptoids for studying self-assembly in solution
    Du, Pu
    Kumar, Revati
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2018, 255
  • [5] Coarse-grained models of tethers for fast self-assembly simulations
    Santos, Aaron
    Singh, Chetana
    Glotzer, Sharon C.
    PHYSICAL REVIEW E, 2010, 81 (01):
  • [6] Coarse-grained modeling of the self-assembly of proteins
    Hwang, Hyonseok
    Schatz, George C.
    Ratner, Mark A.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2007, 233
  • [7] Coarse-Grained Molecular Dynamics Simulations of the Self-Assembly of Amphiphilic Dendrimers as Gene Carriers
    Marquez-Miranda, Valeria
    Araya, Iingrid
    Belen Camarada, Maria
    Ratjen, Lars
    Carolina Otero, Maria
    Danilo Gonzalez-Nilo, Fernando
    BIOPHYSICAL JOURNAL, 2015, 108 (02) : 172A - 172A
  • [8] Coarse-grained lattice models for drying-mediated self-assembly of nanoparticles
    Kletenik-Edelman, Orly
    Sztrum-Vartash, Claudia G.
    Rabani, Eran
    JOURNAL OF MATERIALS CHEMISTRY, 2009, 19 (19) : 2872 - 2876
  • [9] A simulation study of the self-assembly of coarse-grained skin lipids
    Hadley, K. R.
    McCabe, C.
    SOFT MATTER, 2012, 8 (17) : 4802 - 4814
  • [10] Coarse-grained model of tropoelastin self-assembly into nascent fibrils
    Tarakanova, A.
    Ozsvar, J.
    Weiss, A. S.
    Buehler, M. J.
    MATERIALS TODAY BIO, 2019, 3