The hypothalamus and cortex from ob/ob mice and their lean littermates were sonicated and then incubated with glucose-g-phosphate (glucose-6-P) and glycerol phosphate (glycerol-P), The difference between the rates of hydrolysis of glucose-6-P and glycerol-P was taken as the measure of glucose-6-phosphatase activity. The activity was much higher in the hypothalamus from ob/ob mice versus their lean littermates. Activity was undetected in the cortex. These findings raise the possibility that a defect in the regulation of glucose-6-phosphatase activity in a portion of the hypothalamus may relate to the mechanism underlying obesity in the ob/ob mouse. However, obese gene product administration to ob/ob mice, while reducing the body weight, did not alter the glucose-6-phosphatase activity. Copyright (C) 1998 by W.B. Saunders Company.