Duplex Real-Time RT-PCR Assays for the Detection and Typing of Epizootic Haemorrhagic Disease Virus

被引:20
|
作者
Viarouge, Cyril [1 ]
Breard, Emmanuel [1 ]
Zientara, Stephan [1 ]
Vitour, Damien [1 ]
Sailleau, Corinne [1 ]
机构
[1] ANSES INRA ENVA UPEC, UMR Virol 1161, F-94700 Maisons Alfort, France
来源
PLOS ONE | 2015年 / 10卷 / 07期
关键词
POLYMERASE-CHAIN-REACTION; BLUETONGUE-VIRUS; NUCLEIC-ACID; SEROTYPES; CATTLE; ASSIGNMENT; PROTEINS; SEGMENTS; GENOME; ISLAND;
D O I
10.1371/journal.pone.0132540
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Epizootic haemorrhagic disease virus (EHDV) may cause severe clinical episodes in some species of deer and sometimes in cattle. Laboratory diagnosis provides a basis for the design and timely implementation of disease control measures. There are seven distinct EHDV serotypes, VP2 coding segment 2 being the target for serotype specificity. This paper reports the development and validation of eight duplex real-time RT-PCR assays to simultaneously amplify the EHDV target (S9 for the pan-EHDV real-time RT-PCR assay and S2 for the serotyping assays) and endogenous control gene Beta-actin. Analytical and diagnostic sensitivity and specificity, inter-and intra-assay variation and efficiency were evaluated for each assay. All were shown to be highly specific and sensitive.
引用
收藏
页数:11
相关论文
共 50 条
  • [1] Development of Real-Time RT-PCR Assays for Detection and Typing of Epizootic Haemorrhagic Disease Virus
    Maan, N. S.
    Maan, S.
    Potgieter, A. C.
    Wright, I. M.
    Belaganahalli, M.
    Mertens, P. P. C.
    TRANSBOUNDARY AND EMERGING DISEASES, 2017, 64 (04) : 1120 - 1132
  • [2] Real Time RT-PCR Assays for Detection and Typing of African Horse Sickness Virus
    Bachanek-Bankowska, Katarzyna
    Maan, Sushila
    Castillo-Olivares, Javier
    Manning, Nicola M.
    Maan, Narender Singh
    Potgieter, Abraham C.
    Di Nardo, Antonello
    Sutton, Geoff
    Batten, Carrie
    Mertens, Peter P. C.
    PLOS ONE, 2014, 9 (04):
  • [3] Development and Evaluation of Real Time RT-PCR Assays for Detection and Typing of Bluetongue Virus
    Maan, Sushila
    Maan, Narender Singh
    Belaganahalli, Manjunatha N.
    Potgieter, Abraham C.
    Kumar, Vinay
    Batra, Kanisht
    Wright, Isabel M.
    Kirkland, Peter D.
    Mertens, Peter P. C.
    PLOS ONE, 2016, 11 (09):
  • [4] A duplex real-time RT-PCR for the detection of bluetongue virus in bovine semen
    Vanbinst, Tine
    Vandenbussche, Frank
    Dernelle, Eric
    De Clercq, Kris
    JOURNAL OF VIROLOGICAL METHODS, 2010, 169 (01) : 162 - 168
  • [5] Development of duplex real-time RT-PCR for detection of influenza virus A and B
    Goffard, A.
    Beugin, A. -S.
    Hober, D.
    Ogiez, J.
    Dewilde, A.
    PATHOLOGIE BIOLOGIE, 2008, 56 (7-8): : 482 - 486
  • [6] Comparative Evaluation of Standard RT-PCR Assays and Commercial Real-Time RT-PCR Kits for Detection of Lassa Virus
    Luo, Xue-Lian
    Zhang, Xiu-Dan
    Li, Bei-Jie
    Qin, Tian
    Cao, Zhi-Jie
    Fan, Qian-Jin
    Yang, Jing
    Jin, Dong
    Lu, Shan
    Zheng, Ya-Yun
    Xu, Xue-Fang
    Pu, Ji
    Xu, Jianguo
    MICROBIOLOGY SPECTRUM, 2023, 11 (02):
  • [7] Comparison of real-time RT-PCR assays for hepatitis E virus RNA detection
    Mokhtari, Camelia
    Marchadier, Eric
    Haim-Boukobza, Stephanie
    Jeblaoui, Asma
    Tesse, Sophie
    Savary, Jeanine
    Roque-Afonso, Anne Marie
    JOURNAL OF CLINICAL VIROLOGY, 2013, 58 (01) : 36 - 40
  • [8] Gold nanoparticle-based RT-PCR and real-time quantitative RT-PCR assays for detection of Japanese encephalitis virus
    Huang, Su-Hua
    Yang, Tsuey-Ching
    Tsai, Ming-Hong
    Tsai, I-Shou
    Lu, Huang-Chih
    Chuang, Pei-Hsin
    Wan, Lei
    Lin, Ying-Ju
    Lai, Chih-Ho
    Lin, Cheng-Wen
    NANOTECHNOLOGY, 2008, 19 (40)
  • [9] One-step multiplex real-time RT-PCR for detection and typing of dengue virus
    Mun, Myung-Jin
    Bae, Joon-Yong
    Kim, Jin Hyuck
    Kim, Soo Bok
    Lee, Ilseob
    Kim, Jin Il
    Park, Mee Sook
    Park, Man-Seong
    Nam, Yong Suk
    MOLECULAR AND CELLULAR PROBES, 2019, 43 : 86 - 91
  • [10] Rapid detection of human respiratory syncytial virus A and B by duplex real-time RT-PCR
    Todd, Angela K.
    Costa, Anna-Maria
    Waller, Gregory
    Daley, Andrew J.
    Barr, Ian G.
    Deng, Yi-Mo
    JOURNAL OF VIROLOGICAL METHODS, 2021, 294