Initiating the DNA barcoding of Eastern Mediterranean deep-sea biota

被引:3
|
作者
Paz, Guy [1 ]
Yudkovsky, Yana [1 ]
Shaish, Lee [1 ]
Stern, Nir [1 ]
Lubinevski, Hadas [1 ]
Mienis, Henk K. [2 ]
Douek, Jacob [1 ]
Galil, Bella [1 ,2 ]
Goren, Menachem [2 ,3 ]
Rinkevich, Baruch [1 ]
机构
[1] Natl Inst Oceanog, Israel Oceanog & Limnol Res, POB 8030, IL-31080 Haifa, Israel
[2] Tel Aviv Univ, Steinhardt Museum Nat hist, IL-69978 Tel Aviv, Israel
[3] Tel Aviv Univ, Dept Zool, IL-69978 Tel Aviv, Israel
来源
MEDITERRANEAN MARINE SCIENCE | 2018年 / 19卷 / 03期
关键词
Deep sea; Levantine basin; Israel; BoLD; national barcoding; COAST; RECORDS; FISHES; FAUNA; BASIN;
D O I
10.12681/mms.14146
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
This study presents the results obtained from a DNA barcoding survey of the deep-sea macro- and mega-fauna off the Israeli coast (SE Mediterranean, depths of 700 to 1500 meters; during the years 2012-2013). Using trawling and gilhietting we collected 846 organisms, assigned to 37 species, consisting of fish (18). crustaceans (10). mollusks (5), echinoderms (3) and a single brachiopod. The most abundant species were the blackinouth catshark Galeus melastomus, the cosmopolitan decapod Polycheles typhlops and the bivalve Abra longicallus. Two species were sampled for the first time in the southern Levant: the long anned chiroteuthid squid, Chiroteuthis veranyi, and the common mora, Mora moro. Four of the 18 fish species represented 78% of the total fish collected, and two of the 10 crustacean species represented 61% of the total crustaceans collected were abundant. Most other species were represented by fewer than 10 individuals. PCR products for the cytochrome c oxidase sub unit 1(COI) gene were successfully sequenced for the 37 species (1-3 vouchers/species). The vouchered individuals were stored at the Steinhardt Museum of Natural History (Tel Aviv University, Israel) and their COI sequences were uploaded to the BOLD universal data center as part of the Israeli national marine barcoding project. The COI sequences of Acantlzephyra eximia, Gryphus vitreus, Galeodea echinophora, Mesothuria intestinalis and Astropecten irregukuis, are the first records of these species in the BoLD. When compared to the COI sequences in BoLD, the present results reveal some inconsistencies in species identification. This outcome should be taken into consideration, calling for further meticulous taxonomical work on some BoLD vouchered specimens. This study is the first step in the DNA barcoding of the little-known Levant's benthic deep-sea fauna.
引用
收藏
页码:416 / 429
页数:14
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