C1431T Variant of PPARγ Is Associated with Preeclampsia in Pregnant Women

被引:7
|
作者
Liu, Fulin [1 ]
Rouault, Christine [2 ]
Clement, Karine [2 ,3 ]
Zhu, Wencan [4 ]
Degrelle, Severine A. [1 ,5 ]
Charles, Marie-Aline [6 ,7 ]
Heude, Barbara [6 ]
Fournier, Thierry [1 ]
机构
[1] Univ Paris, Pathophysiol & Pharmacotoxicol Human Placenta Pre, PHM3, INSERM, F-75006 Paris, France
[2] Sorbonne Univ, INSERM, Nutr & Obes Approches Syst Res Unit, F-75013 Paris, France
[3] Hop La Pitie Salpetriere, AP HP, Dept Nutr, F-75013 Paris, France
[4] Univ Paris Saclay, INRAE, UMR MIAParis, AgroParisTech, F-75005 Paris, France
[5] Inovarion, F-75005 Paris, France
[6] Univ Paris, INSERM, INRAE, Ctr Res Epidemiol & Stat CRESS, F-75004 Paris, France
[7] Ined, Unite Mixte Inserm Ined EFS ELFE, F-75020 Paris, France
来源
LIFE-BASEL | 2021年 / 11卷 / 10期
关键词
PPAR gamma; SNPs; machine learning; models; preeclampsia; ACTIVATED RECEPTOR-GAMMA; HYPERTENSIVE DISORDERS; PRO12ALA POLYMORPHISM; GROWTH-FACTOR; RISK; GENE; CLASSIFICATION; BIOMARKERS; METAANALYSIS; PREDICTION;
D O I
10.3390/life11101052
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Peroxisome proliferator-activated receptor gamma (PPAR gamma) is essential for placental development, whose SNPs have shown increased susceptibility to pregnancy-related diseases, such as preeclampsia. Our aim was to investigate the association between preeclampsia and three PPAR gamma SNPs (Pro12Ala, C1431T, and C681G), which together with nine clinical factors were used to build a pragmatic model for preeclampsia prediction. Data were collected from 1648 women from the EDEN cohort, of which 35 women had preeclamptic pregnancies, and the remaining 1613 women had normal pregnancies. Univariate analysis comparing preeclamptic patients to the control resulted in the SNP C1431T being the only factor significantly associated with preeclampsia (p < 0.05), with a confidence interval of 95% and odds ratio ranging from 4.90 to 8.75. On the other hand, three methods of multivariate feature selection highlighted seven features that could be potential predictors of preeclampsia: maternal C1431T and C681G variants, obesity, body mass index, number of pregnancies, primiparity, cigarette use, and education. These seven features were further used as input into eight different machine-learning algorithms to create predictive models, whose performances were evaluated based on metrics of accuracy and the area under the receiver operating characteristic curve (AUC). The boost tree-based model performed the best, with respective accuracy and AUC values of 0.971 +/- 0.002 and 0.991 +/- 0.001 in the training set and 0.951 and 0.701 in the testing set. A flowchart based on the boost tree model was constructed to depict the procedure for preeclampsia prediction. This final decision tree showed that the C1431T variant of PPAR gamma is significantly associated with susceptibility to preeclampsia. We believe that this final decision tree could be applied in the clinical prediction of preeclampsia in the very early stages of pregnancy.
引用
收藏
页数:15
相关论文
共 50 条
  • [1] C1431T VARIANT OF PPARg IS ASSOCIATED WITH PREECLAMPSIA IN PREGNANT WOMEN AND THE PREDICTIVE MODEL BUILDING
    Liu, Fulin
    Rouault, Christine
    Clement, Karine
    Tsatsaris, Vassilis
    Degrelle, Severine A.
    Heude, Barbara
    Fournier, Thierry
    PLACENTA, 2021, 112 : E84 - E84
  • [2] The C1431T polymorphism of peroxisome proliferator activated receptor γ (PPARγ) is associated with low risk of diabetes in a Pakistani cohort
    Huma Butt
    Shahida Shabana
    Diabetology & Metabolic Syndrome, 8
  • [3] PPARγ2基因C1431T多态与肥胖的关联研究
    赵艳红
    丛祥凤
    陈曦
    中国分子心脏病学杂志, 2003, (03) : 13 - 16
  • [4] The C1431T polymorphism of peroxisome proliferator activated receptor γ ( PPARγ) is associated with low risk of diabetes in a Pakistani cohort
    Butt, Huma
    Shabana
    Hasnain, Shahida
    DIABETOLOGY & METABOLIC SYNDROME, 2016, 8
  • [5] Association of the Pro12Ala and C1431T Variants of PPARγ and Their Haplotypes with Susceptibility to Gestational Diabetes
    Heude, Barbara
    Pelloux, Veronique
    Forhan, Anne
    Bedel, Jean-Francois
    Lacorte, Jean-Marc
    Clement, Karine
    Charles, Marie-Aline
    JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2011, 96 (10): : E1656 - E1660
  • [6] The association of PPARγ C1431T polymorphism with susceptibility to type 2 diabetes: a systemic review and meta-analysis
    Wu, Yan
    Zhu, Yi
    Fan, Weijian
    INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE, 2017, 10 (03): : 4313 - U91
  • [7] PPARγ2 C1431T genotype increases metabolic syndrome risk in young men with low cardiorespiratory fitness
    Sanada, Kiyoshi
    Iemitsu, Motoyuki
    Murakami, Haruka
    Tabata, Izumi
    Yamamoto, Kenta
    Gando, Yuko
    Suzuki, Katsuhiko
    Higuchi, Mitsuru
    Miyachi, Motohiko
    PHYSIOLOGICAL GENOMICS, 2011, 43 (03) : 103 - 109
  • [8] PPARγ基因C1431T多态性及其与脑出血的关系
    袁宁
    许宏伟
    刘学军
    国际神经病学神经外科学杂志, 2015, 42 (03) : 229 - 232
  • [9] Haplotypic analyses of Pro12Ala and C1431T variants associated with essential hypertension
    Liu, Mengmeng
    Guo, Zhirong
    Wu, Ming
    Chen, Qiu
    Zhou, Zhengyuan
    Luo, Wenshu
    CARDIOLOGY, 2013, 126 : 4 - 5
  • [10] Association between the Prol2Ala, C1431T and C681G polymorphisms in PPAR γ and lipid serum levels
    Gu, Shujun
    Zhou, Zhengyuan
    Guo, Zhirong
    Wu, Ming
    Xu, Mingao
    Zhang, Ning
    Xu, Xiaoyan
    CARDIOLOGY, 2014, 129 : 3 - 3