Single-cell RNA sequencing reveals cell heterogeneity and transcriptome profile of breast cancer lymph node metastasis

被引:74
|
作者
Xu, Kun [1 ]
Wang, Runtian [1 ]
Xie, Hui [2 ]
Hu, Longfei [3 ]
Wang, Cong [4 ]
Xu, Jiali [1 ]
Zhu, Chengjun [1 ]
Liu, Yiqiu [1 ]
Gao, Fangyan [1 ]
Li, Xintong [1 ]
Wang, Cenzhu [1 ]
Huang, Jinyi [1 ]
Zhou, Wenbin [2 ]
Zhou, Guohua [5 ]
Shu, Yongqian [1 ]
Guan, Xiaoxiang [1 ,6 ]
机构
[1] Nanjing Med Univ, Affiliated Hosp 1, Dept Oncol, Nanjing, Peoples R China
[2] Nanjing Med Univ, Affiliated Hosp 1, Dept Breast Surg, Nanjing, Peoples R China
[3] Singleron Biotechnol, Yaogu Ave 11, Nanjing, Jiangsu, Peoples R China
[4] Nanjing Med Univ, Affiliated Hosp 1, Dept Pathol, Nanjing, Peoples R China
[5] Nanjing Univ, Sch Med, Jinling Hosp, Dept Pharmacol, Nanjing, Peoples R China
[6] Nanjing Med Univ, Collaborat Innovat Ctr Personalized Canc Med, Jiangsu Key Lab Canc Biomarkers Prevent & Treatme, Nanjing, Peoples R China
基金
中国国家自然科学基金;
关键词
CYSTATIN C; PROTEIN; GALECTIN-1; ACTIVATION; STC2;
D O I
10.1038/s41389-021-00355-6
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Molecular mechanisms underlying breast cancer lymph node metastasis remain unclear. Using single-cell sequencing, we investigated the transcriptome profile of 96,796 single cells from 15 paired samples of primary tumors and axillary lymph nodes. We identified nine cancer cell subclusters including CD44 + / ALDH2 + /ALDH6A1 + breast cancer stem cells (BCSCs), which had a copy-number variants profile similar to that of normal breast tissue. Importantly, BCSCs existed only in primary tumors and evolved into metastatic clusters infiltrating into lymph nodes. Furthermore, transcriptome data suggested that NECTIN2-TIGIT-mediated interactions between metastatic breast cancer cells and tumor microenvironment (TME) cells, which promoted immune escape and lymph node metastasis. This study is the first to delineate the transcriptome profile of breast cancer lymph node metastasis using single-cell RNA sequencing. Our findings offer novel insights into the mechanisms underlying breast cancer metastasis and have implications in developing novel therapies to inhibit the initiation of breast cancer metastasis.
引用
收藏
页数:12
相关论文
共 50 条
  • [1] Single-cell RNA sequencing reveals cell heterogeneity and transcriptome profile of breast cancer lymph node metastasis
    Kun Xu
    Runtian Wang
    Hui Xie
    Longfei Hu
    Cong Wang
    Jiali Xu
    Chengjun Zhu
    Yiqiu Liu
    Fangyan Gao
    Xintong Li
    Cenzhu Wang
    Jinyi Huang
    Wenbin Zhou
    Guohua Zhou
    Yongqian Shu
    Xiaoxiang Guan
    [J]. Oncogenesis, 10
  • [2] Single-Cell RNA Sequencing of Lymph Node Stromal Cells Reveals Niche-Associated Heterogeneity
    Rodda, Lauren B.
    Lu, Erick
    Bennett, Mariko L.
    Sokol, Caroline L.
    Wang, Xiaoming
    Luther, Sanjiv A.
    Barres, Ben A.
    Luster, Andrew D.
    Ye, Chun Jimmie
    Cyster, Jason G.
    [J]. IMMUNITY, 2018, 48 (05) : 1014 - +
  • [3] Single-cell transcriptome sequencing reveals heterogeneity of gastric cancer: progress and prospects
    Deng, Gaohua
    Zhang, Xu
    Chen, Yonglan
    Liang, Sicheng
    Liu, Sha
    Yu, Zehui
    Lu, Muhan
    [J]. FRONTIERS IN ONCOLOGY, 2023, 13
  • [4] The heterogeneity of breast cancer metastasis: a bioinformatics analysis utilizing single-cell RNA sequencing data
    Sanjaya, Ardo
    Ratnawati, Hana
    Adhika, Oeij Anindita
    Rahmatilah, Faiz Rizqy
    [J]. BREAST CANCER RESEARCH AND TREATMENT, 2024, 208 (02) : 379 - 390
  • [5] Single-Cell RNA Sequencing Reveals Endothelial Cell Transcriptome Heterogeneity Under Homeostatic Laminar Flow
    Liu, Ziqing
    Ruter, Dana L.
    Quigley, Kaitlyn
    Tanke, Natalie T.
    Jiang, Yuchao
    Bautch, Victoria L.
    [J]. ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2021, 41 (10) : 2575 - 2584
  • [6] Single-cell RNA sequencing reveals the heterogeneity of epithelial cell and fibroblast cells from non- to metastatic lymph node OTSCC
    Song, Dandan
    Yang, Fei
    Sun, Yang
    Wu, Xingwen
    Zhou, Qianrong
    Bi, Wei
    Sun, Jian
    Li, Siyi
    Yu, Youcheng
    [J]. FASEB JOURNAL, 2024, 38 (01):
  • [7] Single-cell transcriptome sequencing analysis reveals gynaecomastia to breast cancer transition
    Sun, H.
    Yang, C.
    Wang, Z.
    Shi, L.
    Xia, T.
    Wei, J.
    Ding, Q.
    [J]. BREAST, 2021, 56 : S26 - S26
  • [8] Single-cell RNA-sequencing reveals distinct patterns of cell state heterogeneity in mouse models of breast cancer
    Yeo, Syn Kok
    Zhu, Xiaoting
    Okamoto, Takako
    Hao, Mingang
    Wang, Cailian
    Lu, Peixin
    Lu, Long Jason
    Guan, Jun-Lin
    [J]. ELIFE, 2020, 9
  • [9] Single-cell transcriptome sequencing reveals tumor heterogeneity in family neuroblastoma
    Zhang, Yunlong
    Ma, Yue
    Liu, Qingqing
    Du, Yifei
    Peng, Liang
    Zhou, Jianwu
    Zhao, Zhenzhen
    Li, Changchun
    Wang, Shan
    [J]. FRONTIERS IN IMMUNOLOGY, 2023, 14
  • [10] Single-cell and bulk RNA sequencing reveal heterogeneity and diagnostic markers in papillary thyroid carcinoma lymph-node metastasis
    Lu, D. -N.
    Zhang, W. -C
    Lin, Y. -Z
    Jiang, H. -Y
    He, R.
    Li, S. -L
    Zhang, Y. -N
    Shao, C. -Y
    Zheng, C. -M
    Xu, J. -J
    Ge, M. -H
    [J]. JOURNAL OF ENDOCRINOLOGICAL INVESTIGATION, 2024, 47 (06) : 1513 - 1530