An algorithm to detect somatic mutations in cancer specimens using mass spectrometric genotyping

被引：0
|
作者：
Hatton, Charles [1 ]
Niu, Lili [1 ]
Davis, Matthew [1 ]
Mondal, Chandrani [1 ]
Luongo, Lauren [1 ]
Go, Christina [1 ]
Jones, Robert T. [1 ]
Roden, Christine [1 ]
Palescandolo, Emanuele [1 ]
Van Hummelen, Paul [1 ]
Garraway, Levi A. [1 ]
Meyerson, Matthew [1 ]
Hahn, William [1 ]
MacConaill, Laura E. [1 ]
机构：
[1] Dana Farber Canc Inst, Boston, MA 02115 USA
来源：
CANCER RESEARCH | 2012年 / 72卷
关键词：
D O I：
10.1158/1538-7445.AM2012-3965
中图分类号：
R73 [肿瘤学];
学科分类号：
100214 ;
摘要：
3965
引用
收藏
页数：2
相关论文
共 50 条
  • [1] Targeted Mass Spectrometry Analyses of Somatic Mutations in Colorectal Cancer Specimens Using Differential Ion Mobility
    Wu, Zhaoguan
    Bonneil, Eric
    Belford, Michael
    Boeser, Cornelia
    Dunyach, Jean-Jacques
    Thibault, Pierre
    JOURNAL OF PROTEOME RESEARCH, 2023, 23 (02) : 644 - 652
  • [2] An ensemble approach to accurately detect somatic mutations using SomaticSeq
    Li Tai Fang
    Pegah Tootoonchi Afshar
    Aparna Chhibber
    Marghoob Mohiyuddin
    Yu Fan
    John C. Mu
    Greg Gibeling
    Sharon Barr
    Narges Bani Asadi
    Mark B. Gerstein
    Daniel C. Koboldt
    Wenyi Wang
    Wing H. Wong
    Hugo Y.K. Lam
    Genome Biology, 16
  • [3] An ensemble approach to accurately detect somatic mutations using SomaticSeq
    Fang, Li Tai
    Afshar, Pegah Tootoonchi
    Chhibber, Aparna
    Mohiyuddin, Marghoob
    Fan, Yu
    Mu, John C.
    Gibeling, Greg
    Barr, Sharon
    Asadi, Narges Bani
    Gerstein, Mark B.
    Koboldt, Daniel C.
    Wang, Wenyi
    Wong, Wing H.
    Lam, Hugo Y. K.
    GENOME BIOLOGY, 2015, 16
  • [4] Polytect, a robust algorithm to detect somatic mutations in polymorphic MHC/HLA genes
    Mumphrey, Michael Brodie
    Parolia, Abhijit
    Kumar-Sinha, Chandan
    Cieslik, Marcin
    CANCER RESEARCH, 2020, 80 (16)
  • [5] Germline and Somatic Mutations in Archived Breast Cancer Specimens of Different Subtypes
    I. S. Abramov
    Yu. S. Korneva
    O. A. Shisterova
    A. Yu. Ikonnikova
    M. A. Emelyanova
    T. S. Lisitsa
    G. S. Krasnov
    T. V. Nasedkina
    Molecular Biology, 2021, 55 : 354 - 362
  • [6] Germline and Somatic Mutations in Archived Breast Cancer Specimens of Different Subtypes
    Abramov, I. S.
    Korneva, Yu S.
    Shisterova, O. A.
    Ikonnikova, A. Yu
    Emelyanova, M. A.
    Lisitsa, T. S.
    Krasnov, G. S.
    Nasedkina, T., V
    MOLECULAR BIOLOGY, 2021, 55 (03) : 354 - 362
  • [7] Single molecule sequencing to detect and characterize somatic mutations in cancer genomes
    Mardis, Elaine
    Maupin, Rachel
    Travers, Kevin
    Chin, Chen-Shan
    Eid, John
    Chau, Benson
    Londry, Jason
    Baybayan, Primo
    Magrini, Vince
    McLellan, Mike
    Wylie, Todd
    CANCER RESEARCH, 2010, 70
  • [8] Profile: Results from Multiplexed Mass Spectrometric Genotyping of 2178 Cancer Patients
    Lindeman, N. I.
    MacConaill, L. E.
    Garcia, E.
    Kuo, F. C.
    Longtine, J. A.
    Hahn, W. C.
    Kantoff, P. W.
    Rollins, B. J.
    LABORATORY INVESTIGATION, 2013, 93 : 436A - 436A
  • [9] Profile: Results from Multiplexed Mass Spectrometric Genotyping of 2178 Cancer Patients
    Lindeman, N. I.
    MacConaill, L. E.
    Garcia, E.
    Kuo, F. C.
    Longtine, J. A.
    Hahn, W. C.
    Kantoff, P. W.
    Rollins, B. J.
    MODERN PATHOLOGY, 2013, 26 : 436A - 436A
  • [10] Genotyping of EGFR Mutations from Bronchial Cytological Specimens in Slovakian Lung Cancer Patients
    Baluchova, K.
    Zahradnikova, M.
    Bakes, P.
    Trubacova, S.
    Novosadova, H.
    Halasova, E.
    Majer, I.
    Hlavcak, P.
    PULMONARY DYSFUNCTION AND DISEASE, 2016, 934 : 49 - 61
12345