Chromosome 11q13.3 variant modifies renal cell cancer risk in a Chinese population

被引:12
|
作者
Cao, Qiang [1 ]
Qin, Chao [1 ]
Ju, Xiaobing [1 ]
Meng, Xiaoxin [1 ]
Wang, Meilin [2 ]
Zhu, Jian [1 ]
Li, Pu [1 ]
Chen, Jiawei [1 ]
Zhang, Zhengdong [2 ]
Yin, Changjun [1 ]
机构
[1] Nanjing Med Univ, Affiliated Hosp 1, Dept Urol, Nanjing 210029, Jiangsu, Peoples R China
[2] Nanjing Med Univ, Sch Publ Hlth, Dept Mol & Genet Toxicol, Nanjing 210029, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
GENOME-WIDE ASSOCIATION; CYCLIN D1; CARCINOMA RISK; BREAST-CANCER; IDENTIFIES; POLYMORPHISMS; OVEREXPRESSION; EXPRESSION;
D O I
10.1093/mutage/ger085
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
A recent genome-wide association study of renal cell carcinoma (RCC) in European population has identified genetic variants in the regions of 2p21 (rs7579899), 11q13.3 (rs7105934) and 12q24.31 (rs4765623) conferred susceptibility to RCC. In our study, we assessed whether these polymorphisms are also associated with RCC risk in a Chinese population. We genotyped these polymorphisms using TaqMan method and assessed their associations with RCC risk in a case-control study of 710 patients with histologically confirmed RCC and 760 cancer-free controls. Normal renal tissues adjacent to tumors were used to evaluate the functional consequences of these polymorphisms. We found that rs7105934 was significantly associated with reduced RCC risk [adjusted odds ratio (OR) = 0.67, 95% confidence intervals (CIs) = 0.47-0.95, GA+AA versus GG], particularly among subgroups of normal-weight individuals (OR = 0.51, 95%CI = 0.29-0.88), never-smokers (OR = 0.53, 95%CI = 0.33-0.85) and non-drinkers (OR = 0.57, 95%CI = 0.370.87). Furthermore, the rs7105934 GA genotype was associated with lower levels of CCND1 mRNA compared with GG genotype, although this association was only marginally significant (P = 0.055). No significant association between rs7579899 or rs7105934 and RCC risk was observed. Our results suggest that rs7105934 on 11q13.3 may confer susceptibility to RCC in our population. Large population-based prospective and functional studies are required to validate the associations between these loci and RCC risk.
引用
收藏
页码:345 / 350
页数:6
相关论文
共 50 条
  • [1] Clinical Impact of 11q13.3 Amplification on Immune Cell Infiltration and Prognosis in Breast Cancer
    Zhou, Renyu
    Zhu, Xiaoxi
    Peng, Yulong
    Zhong, Lijuan
    Peng, Lilin
    Yang, Bo
    Meng, Yuhua
    Chen, Xuanzhao
    Lu, Yuanzhi
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2022, 15 : 4037 - 4052
  • [2] Mapping FRA11A, a folate-sensitive fragile site in human chromosome band 11q13.3
    Perucca-Lostanlen, D
    Hecht, BK
    Courseaux, A
    Grosgeorge, J
    Hecht, F
    Gaudray, P
    CYTOGENETICS AND CELL GENETICS, 1997, 79 (1-2): : 88 - 91
  • [3] A GWAS-identified susceptibility locus on chromosome 11q13.3 and its putative molecular target for prediction of postoperative prognosis of human renal cell carcinoma
    Su, Tong
    Han, Yifang
    Yu, Yongwei
    Tan, Xiaojie
    Li, Xiaopan
    Hou, Jianguo
    Du, Yan
    Shen, Jian
    Wang, Guoping
    Ma, Liye
    Jiang, Shuang
    Zhang, Hongwei
    Cao, Guangwen
    ONCOLOGY LETTERS, 2013, 6 (02) : 421 - 426
  • [4] Refinement of the Chronic Distal Spinal Muscular Atrophy (Chronic DSMA) locus on chromosome 11q13.3 and evidence of a founder haplotype in the European population.
    Viollet, L
    Zarhrate, M
    Maystadt, I
    Munnich, A
    AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 73 (05) : 480 - 480
  • [5] Functional variant rs9344 at 11q13.3 regulates CCND1 expression in multiple myeloma with t(11;14)
    Tang, Hongwei
    Yan, Huihuang
    Shivaram, Suganti
    Lehman, Stacey
    Sharma, Neeraj
    Smadbeck, James
    Zepeda-Mendoza, Cinthya
    Tian, Shulan
    Asmann, Yan
    Vachon, Celine
    Maia, Alexandre Gaspar
    Keats, Jonathan
    Bergsagel, P. Leif
    Fonseca, Rafael
    Stewart, A. Keith
    Hsu, Joel-Sean
    Kandasamy, Richard K.
    Pandey, Akhilesh
    Kaddoura, Marcella A.
    Maura, Francesco
    Mitra, Amit
    Rajkumar, S. Vincent
    Kumar, Shaji K.
    Elhaik, Eran
    Braggio, Esteban
    Baughn, Linda B.
    LEUKEMIA, 2025, 39 (01) : 42 - 50
  • [6] Copy Number Gain of 11q13.3 Genes Associates with Pathological Stage in Hypopharyngeal Squamous Cell Carcinoma
    Pattle, Samuel B.
    Utjesanovic, Natasa
    Togo, Athena
    Wells, Lucy
    Conn, Brendan
    Monaghan, Hannah
    Junor, Elizabeth
    Johannessen, Ingolfur
    Cuschieri, Kate
    Talbot, Simon
    GENES CHROMOSOMES & CANCER, 2017, 56 (03): : 185 - 198
  • [7] TRANSLOCATION BREAKPOINT IN T(11-14) IN B-CELL LEUKEMIA IS NOT AT THE RARE FRAGILE SITE AT 11Q13.3
    PUSPURS, AH
    BAKER, E
    CALLEN, DF
    FRATINI, A
    SUTHERLAND, GR
    CANCER GENETICS AND CYTOGENETICS, 1988, 31 (01) : 25 - 30
  • [8] Common genetic variants at the 11q13.3 renal cancer susceptibility locus influence binding of HIF to an enhancer of cyclin D1 expression
    Johannes Schödel
    Chiara Bardella
    Lina K Sciesielski
    Jill M Brown
    Chris W Pugh
    Veronica Buckle
    Ian P Tomlinson
    Peter J Ratcliffe
    David R Mole
    Nature Genetics, 2012, 44 : 420 - 425
  • [9] Genome-wide association study of renal cell carcinoma identifies two susceptibility loci on 2p21 and 11q13.3
    Mark P Purdue
    Mattias Johansson
    Diana Zelenika
    Jorge R Toro
    Ghislaine Scelo
    Lee E Moore
    Egor Prokhortchouk
    Xifeng Wu
    Lambertus A Kiemeney
    Valerie Gaborieau
    Kevin B Jacobs
    Wong-Ho Chow
    David Zaridze
    Vsevolod Matveev
    Jan Lubinski
    Joanna Trubicka
    Neonila Szeszenia-Dabrowska
    Jolanta Lissowska
    Péter Rudnai
    Eleonora Fabianova
    Alexandru Bucur
    Vladimir Bencko
    Lenka Foretova
    Vladimir Janout
    Paolo Boffetta
    Joanne S Colt
    Faith G Davis
    Kendra L Schwartz
    Rosamonde E Banks
    Peter J Selby
    Patricia Harnden
    Christine D Berg
    Ann W Hsing
    Robert L Grubb
    Heiner Boeing
    Paolo Vineis
    Françoise Clavel-Chapelon
    Domenico Palli
    Rosario Tumino
    Vittorio Krogh
    Salvatore Panico
    Eric J Duell
    José Ramón Quirós
    Maria-José Sanchez
    Carmen Navarro
    Eva Ardanaz
    Miren Dorronsoro
    Kay-Tee Khaw
    Naomi E Allen
    H Bas Bueno-de-Mesquita
    Nature Genetics, 2011, 43 : 60 - 65
  • [10] Common genetic variants at the 11q13.3 renal cancer susceptibility locus influence binding of HIF to an enhancer of cyclin D1 expression
    Schoedel, Johannes
    Bardella, Chiara
    Sciesielski, Lina K.
    Brown, Jill M.
    Pugh, Chris W.
    Buckle, Veronica
    Tomlinson, Ian P.
    Ratcliffe, Peter J.
    Mole, David R.
    NATURE GENETICS, 2012, 44 (04) : 420 - U229