Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining

被引:4
|
作者
Li, Yuan-Yuan [1 ,2 ]
Zang, Li-Ping [1 ]
Chen, Xiao-Yong [1 ,2 ]
机构
[1] E China Normal Univ, Dept Environm Sci, Shanghai Key Lab Ecol Proc & Restorat, Shanghai 200062, Peoples R China
[2] Tiantong State Observat Stn Forest Ecosyst, Shanghai 200062, Peoples R China
关键词
Ginkgo biloba; ESTs; Microsatellites; Genetic diversity; GENETIC DIVERSITY;
D O I
10.1007/s12686-009-9019-6
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
Ginkgo biloba L. is a famous living fossil plant endemic to China. We report twelve polymorphic simple sequence repeat (SSRs) markers of G. biloba by mining expressed sequence tags (ESTs). One locus was significantly deviated from Hardy-Weinberg equilibrium. The number of alleles per locus ranged from 2 to 5. The PIC values were from 0.058 to 0.776. Observed and expected heterozygosity ranged from 0.050 to 0.776, and 0.055 to 0.799, respectively. These markers will be available for studies of population genetics, reproductive ecology and conservation genetics for G. biloba.
引用
收藏
页码:81 / 83
页数:3
相关论文
共 50 条
  • [1] Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining
    Yuan-Yuan Li
    Li-Ping Zang
    Xiao-Yong Chen
    Conservation Genetics Resources, 2009, 1 : 81 - 83
  • [2] Development of microsatellite markers in ginkgo (Ginkgo biloba L.)
    Yan, X. F.
    Lian, C. L.
    Hogetsu, T.
    MOLECULAR ECOLOGY NOTES, 2006, 6 (02): : 301 - 302
  • [3] Develop Microsatellite Markers for Ginkgo biloba L. Clones
    Xu, Li-an
    Wang, Xing-xing
    Xu, Meng
    Tao, Yuan-yuan
    Zhang, Donglin
    Yuan, Jun
    HORTSCIENCE, 2014, 49 (09) : S361 - S361
  • [4] Development of novel chloroplast microsatellite markers for Ginkgo biloba
    Xu, M.
    Xu, L. A.
    Cao, F. L.
    Zhang, H. J.
    Yu, F. X.
    GENETICS AND MOLECULAR RESEARCH, 2015, 14 (03) : 7715 - 7720
  • [5] Development of polymorphic microsatellite markers in sesame (Sesamum indicum L.)
    Dixit, A
    Jin, MH
    Chung, JW
    Yu, JW
    Chung, HK
    Ma, KH
    Park, YJ
    Cho, EG
    MOLECULAR ECOLOGY NOTES, 2005, 5 (04): : 736 - 738
  • [6] Development and application of SCAR markers for sex identification in the dioecious species Ginkgo biloba L.
    Liao, Liqin
    Liu, Jun
    Dai, Yanxia
    Li, Qian
    Xie, Ming
    Chen, Qijiong
    Yin, Huaqun
    Qiu, Guanzhou
    Liu, Xueduan
    EUPHYTICA, 2009, 169 (01) : 49 - 55
  • [7] Development and application of SCAR markers for sex identification in the dioecious species Ginkgo biloba L.
    Liqin Liao
    Jun Liu
    Yanxia Dai
    Qian Li
    Ming Xie
    Qijiong Chen
    Huaqun Yin
    Guanzhou Qiu
    Xueduan Liu
    Euphytica, 2009, 169 : 49 - 55
  • [8] Development of highly polymorphic microsatellite markers for Campanula glomerata L. (Campanulaceae)
    Fabienne Van Rossum
    Cécile Godé
    Molecular Biology Reports, 2022, 49 : 805 - 810
  • [9] Development of highly polymorphic microsatellite markers for Campanula glomerata L. (Campanulaceae)
    Van Rossum, Fabienne
    Gode, Cecile
    MOLECULAR BIOLOGY REPORTS, 2022, 49 (01) : 805 - 810
  • [10] Development and characterization of novel microsatellite markers for Ginkgo biloba using 454 pyrosequencing
    Zhou, Q.
    Wang, X. X.
    Xu, M.
    Cao, F. L.
    Yu, F. X.
    Xu, L. A.
    GENETICS AND MOLECULAR RESEARCH, 2016, 15 (01)