Microbial-type terpene synthase genes occur widely in nonseed land plants, but not in seed plants

被引:71
|
作者
Jia, Qidong [1 ]
Li, Guanglin [2 ,3 ]
Kollner, Tobias G. [4 ]
Fu, Jianyu [2 ,5 ]
Chen, Xinlu [2 ]
Xiong, Wangdan [2 ]
Crandall-Stotler, Barbara J. [6 ]
Bowman, John L. [7 ]
Weston, David J. [8 ]
Zhang, Yong [9 ]
Chen, Li [9 ]
Xie, Yinlong [9 ]
Li, Fay-Wei [10 ]
Rothfels, Carl J. [10 ]
Larsson, Anders [11 ]
Graham, Sean W. [12 ]
Stevenson, Dennis W. [13 ]
Wong, Gane Ka-Shu [9 ,14 ,15 ]
Gershenzon, Jonathan [4 ]
Chen, Feng [1 ,2 ]
机构
[1] Univ Tennessee, Grad Sch Genome Sci & Technol, Knoxville, TN 37996 USA
[2] Univ Tennessee, Dept Plant Sci, Knoxville, TN 37996 USA
[3] Shaanxi Normal Univ, Coll Life Sci, Xian 710062, Peoples R China
[4] Max Planck Inst Chem Ecol, Dept Biochem, D-07745 Jena, Germany
[5] Chinese Acad Agr Sci, Tea Res Inst, Hangzhou 310008, Zhejiang, Peoples R China
[6] Southern Illinois Univ, Dept Plant Biol, Carbondale, IL 62901 USA
[7] Monash Univ, Sch Biol Sci, Melbourne, Vic 3800, Australia
[8] Oak Ridge Natl Lab, Biosci Div, Oak Ridge, TN 37831 USA
[9] Beijing Genom Inst Shenzhen, Beishan Ind Zone, Shenzhen 518083, Peoples R China
[10] Univ Calif Berkeley, Dept Integrat Biol, Berkeley, CA 94720 USA
[11] Uppsala Univ, Systemat Biol, S-75236 Uppsala, Sweden
[12] Univ British Columbia, Dept Bot, Vancouver, BC V6T 1Z4, Canada
[13] New York Bot Garden, Plant Genom Program, Bronx, NY 10458 USA
[14] Univ Alberta, Dept Biol Sci, Edmonton, AB T6G 2E9, Canada
[15] Univ Alberta, Dept Med, Edmonton, AB T6G 2E1, Canada
关键词
terpene synthase; specialized metabolism; nonseed plant; gene evolution; BIOSYNTHESIS; EVOLUTION; CYCLASE;
D O I
10.1073/pnas.1607973113
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The vast abundance of terpene natural products in nature is due to enzymes known as terpene synthases (TPSs) that convert acyclic prenyl diphosphate precursors into a multitude of cyclic and acyclic carbon skeletons. Yet the evolution of TPSs is not well understood at higher levels of classification. Microbial TPSs from bacteria and fungi are only distantly related to typical plant TPSs, whereas genes similar to microbial TPS genes have been recently identified in the lycophyte Selaginella moellendorffii. The goal of this study was to investigate the distribution, evolution, and biochemical functions of microbial terpene synthase-like (MTPSL) genes in other plants. By analyzing the transcriptomes of 1,103 plant species ranging from green algae to flowering plants, putative MTPSL genes were identified predominantly from nonseed plants, including liverworts, mosses, hornworts, lycophytes, and monilophytes. Directed searching for MTPSL genes in the sequenced genomes of a wide range of seed plants confirmed their general absence in this group. Among themselves, MTPSL proteins from nonseed plants form four major groups, with two of these more closely related to bacterial TPSs and the other two to fungal TPSs. Two of the four groups contain a canonical aspartate-rich "DDxxD" motif. The third group has a "DDxxxD" motif, and the fourth group has only the first two "DD" conserved in this motif. Upon heterologous expression, representative members from each of the four groups displayed diverse catalytic functions as monoterpene and sesquiterpene synthases, suggesting these are important for terpene formation in nonseed plants.
引用
收藏
页码:12328 / 12333
页数:6
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共 15 条
  • [1] SOYBEAN SEED LECTIN GENE AND FLANKING NONSEED PROTEIN GENES ARE DEVELOPMENTALLY REGULATED IN TRANSFORMED TOBACCO PLANTS
    OKAMURO, JK
    JOFUKU, KD
    GOLDBERG, RB
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (21) : 8240 - 8244
  • [2] Terpene synthase genes in eukaryotes beyond plants and fungi: Occurrence in social amoebae
    Chen, Xinlu
    Kollner, Tobias G.
    Jia, Qidong
    Norris, Ayla
    Santhanam, Balaji
    Rabe, Patrick
    Dickschat, Jeroen S.
    Shaulsky, Gad
    Gershenzon, Jonathan
    Chen, Feng
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 113 (43) : 12132 - 12137
  • [3] Isolation and Functional Characterization of New Terpene Synthase Genes from Traditional Edible Plants
    Hattan, Jun-ichiro
    Shindo, Kazutoshi
    Sasaki, Tetsuya
    Misawa, Norihiko
    [J]. JOURNAL OF OLEO SCIENCE, 2018, 67 (10) : 1235 - 1246
  • [4] Identification and characterization of type III polyketide synthase genes from culturable endophytes of ethnomedicinal plants
    Manoharan, Gomathi
    Sairam, Thiagarajan
    Thangamani, Rajesh
    Ramakrishnan, Dhivya
    Tiwari, Manish K.
    Lee, Jung-Kul
    Marimuthu, Jeya
    [J]. ENZYME AND MICROBIAL TECHNOLOGY, 2019, 131
  • [5] Phylogeny and evolutionary history of glycogen synthase kinase 3/SHAGGY-like kinase genes in land plants
    Qi, Xinshuai
    Chanderbali, Andre S.
    Wong, Gane Ka-Shu
    Soltis, Douglas E.
    Soltis, Pamela S.
    [J]. BMC EVOLUTIONARY BIOLOGY, 2013, 13
  • [6] Phylogeny and evolutionary history of glycogen synthase kinase 3/SHAGGY-like kinase genes in land plants
    Xinshuai Qi
    André S Chanderbali
    Gane Ka-Shu Wong
    Douglas E Soltis
    Pamela S Soltis
    [J]. BMC Evolutionary Biology, 13
  • [7] Purification and structural analysis of volatile sesquiterpenes produced by Escherichia coli carrying unidentified terpene synthase genes from edible plants of the family Araliaceae
    Shindo, Kazutoshi
    Hattan, Jun-ichiro
    Kato, Mariko
    Sato, Miho
    Ito, Tomoko
    Shibuya, Yurika
    Watanabe, Arisa
    Sugiyama, Maki
    Nakamura, Yuri
    Misawa, Norihiko
    [J]. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2018, 82 (06) : 978 - 985
  • [8] Genome screening for reducing type I polyketide synthase genes in tropical fungi associated with medicinal plants
    Juangjun Jumpathong
    Yasuyo Seshime
    Isao Fujii
    John Peberdy
    Saisamorn Lumyong
    [J]. World Journal of Microbiology and Biotechnology, 2011, 27 : 1989 - 1995
  • [9] Genome screening for reducing type I polyketide synthase genes in tropical fungi associated with medicinal plants
    Jumpathong, Juangjun
    Seshime, Yasuyo
    Fujii, Isao
    Peberdy, John
    Lumyong, Saisamorn
    [J]. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2011, 27 (09): : 1989 - 1995
  • [10] A Survey of MIKC Type MADS-Box Genes in Non-seed Plants: Algae, Bryophytes, Lycophytes and Ferns
    Thangavel, Gokilavani
    Nayar, Saraswati
    [J]. FRONTIERS IN PLANT SCIENCE, 2018, 9