Inference for reclassification statistics under nested and non-nested models for biomarker evaluation

被引:6
|
作者
Shao, Fang [1 ]
Li, Jialiang [2 ,3 ,4 ]
Fine, Jason [5 ]
Wong, Weng Kee [6 ]
Pencina, Michael [7 ]
机构
[1] Nanjing Med Univ, Dept Epidemiol & Biostat, Nanjing, Jiangsu, Peoples R China
[2] Natl Univ Singapore, Dept Stat & Appl Probabil, Singapore 117548, Singapore
[3] Duke NUS Grad Med Sch, Singapore, Singapore
[4] Singapore Eye Res Inst, Singapore, Singapore
[5] Univ N Carolina, Dept Biostat, Chapel Hill, NC USA
[6] Univ Calif Los Angeles, Sch Publ Hlth, Dept Biostat, Los Angeles, CA 90024 USA
[7] Duke Univ, Dept Biostat, Durham, NC USA
基金
英国医学研究理事会;
关键词
Bootstrap; integrated discrimination improvement; net reclassification improvement; penalized estimation; semiparametric regression; INTEGRATED DISCRIMINATION IMPROVEMENT; DIAGNOSTIC-ACCURACY; ORACLE PROPERTIES; SELECTION; LASSO; PERFORMANCE; COEFFICIENT; MARKER; CURVE;
D O I
10.3109/1354750X.2015.1068854
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The Net Reclassification Improvement (NRI) and the Integrated Discrimination Improvement (IDI) are used to evaluate the diagnostic accuracy improvement for biomarkers in a wide range of applications. Most applications for these reclassification metrics are confined to nested model comparison. We emphasize the important extensions of these metrics to the non-nested comparison. Non-nested models are important in practice, in particular, in high-dimensional data analysis and in sophisticated semiparametric modeling. We demonstrate that the assessment of accuracy improvement may follow the familiar NRI and IDI evaluation. While the statistical properties of the estimators for NRI and IDI have been well studied in the nested setting, one cannot always rely on these asymptotic results to implement the inference procedure for practical data, especially for testing the null hypothesis of no improvement, and these properties have not been established for the non-nested setting. We propose a generic bootstrap re-sampling procedure for the construction of confidence intervals and hypothesis tests. Extensive simulations and real biomedical data examples illustrate the applicability of the proposed inference methods for both nested and non-nested models.
引用
收藏
页码:240 / 252
页数:13
相关论文
共 50 条
  • [1] ,Non-nested hypothesis testing inference for GAMLSS models
    Cribari-Neto, Francisco
    Lucena, Sadraque E. F.
    [J]. JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION, 2017, 87 (06) : 1189 - 1205
  • [2] Testing nested and non-nested periodically integrated autoregressive models
    Franses, PH
    McAleer, M
    [J]. COMMUNICATIONS IN STATISTICS-THEORY AND METHODS, 1997, 26 (06) : 1461 - 1475
  • [3] NON-NESTED MODELS - EDITORS INTRODUCTION
    WHITE, H
    [J]. JOURNAL OF ECONOMETRICS, 1983, 21 (01) : 1 - 3
  • [4] TESTING NESTED OR NON-NESTED HYPOTHESES
    GOURIEROUX, C
    MONFORT, A
    TROGNON, A
    [J]. JOURNAL OF ECONOMETRICS, 1983, 21 (01) : 83 - 115
  • [5] Comparison of non-nested models under a general measure of distance
    Ng, Chi Tim
    Joe, Harry
    [J]. JOURNAL OF STATISTICAL PLANNING AND INFERENCE, 2016, 170 : 166 - 185
  • [6] Evaluation and testing of non-nested specifications of spatial econometric models
    Formanek, Tomas
    [J]. 39TH INTERNATIONAL CONFERENCE ON MATHEMATICAL METHODS IN ECONOMICS (MME 2021), 2021, : 106 - 111
  • [7] Post-J test inference in non-nested linear regression models
    CHEN XinJie
    FAN YanQin
    WAN Alan
    ZOU GuoHua
    [J]. Science China Mathematics, 2015, 58 (06) : 1203 - 1216
  • [8] Post-J test inference in non-nested linear regression models
    XinJie Chen
    YanQin Fan
    Alan Wan
    GuoHua Zou
    [J]. Science China Mathematics, 2015, 58 : 1203 - 1216
  • [9] Post-J test inference in non-nested linear regression models
    Chen XinJie
    Fan YanQin
    Wan, Alan
    Zou GuoHua
    [J]. SCIENCE CHINA-MATHEMATICS, 2015, 58 (06) : 1203 - 1216
  • [10] Power in non-nested models: a comparative study
    Ayuda, MI
    Aznar, A
    [J]. APPLIED ECONOMICS LETTERS, 2000, 7 (07) : 483 - 486