The chloroplast genome of an endangered tree Artocarpus nanchuanensis (Moraceae)

被引:2
|
作者
Li, Yuran [1 ,2 ]
Song, Yu [1 ]
机构
[1] Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Ctr Integrat Conservat, Kunming, Yunnan, Peoples R China
[2] Univ Chinese Acad Sci, Coll Life Sci, Beijing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
关键词
Artocarpus nanchuanensis; Endangered species; chloroplast genome; phylogenetic analysis; BIOGEOGRAPHY;
D O I
10.1080/23802359.2019.1574684
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete chloroplast genome sequence of Artocarpus nanchuanensis was determined, an Endangered species of Artocarpus in the family Moraceae. The plastome is 160,752 bp in length, exhibiting a characteristic quadripartite structure with a pair of inverted repeat regions (IRs) of 25,693 bp, separated by a large single-copy region (LSC) and a small single-copy region (SSC) of 89,345 bp and 20,021 bp, respectively. Further, the maximum likelihood phylogenetic analysis was conducted using 24 complete plastomes of the Moraceae and Cannabaceae, which supports the close relationship between Artocarpus and Morus.
引用
收藏
页码:893 / 894
页数:2
相关论文
共 50 条
  • [1] A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
    He, Jiaoyu
    Bao, Shanfei
    Deng, Junhang
    Li, Qiufu
    Ma, Shiyu
    Liu, Yiran
    Cui, Yanru
    Zhu, Yuqi
    Wei, Xia
    Ding, Xianping
    Ke, Kehui
    Chen, Chaojie
    [J]. GIGASCIENCE, 2022, 11
  • [2] A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
    He, Jiaoyu
    Bao, Shanfei
    Deng, Junhang
    Li, Qiufu
    Ma, Shiyu
    Liu, Yiran
    Cui, Yanru
    Zhu, Yuqi
    Wei, Xia
    Ding, Xianping
    Ke, Kehui
    Chen, Chaojie
    [J]. GIGASCIENCE, 2022, 11
  • [3] A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
    He, Jiaoyu
    Bao, Shanfei
    Deng, Junhang
    Li, Qiufu
    Ma, Shiyu
    Liu, Yiran
    Cui, Yanru
    Zhu, Yuqi
    Wei, Xia
    Ding, Xianping
    Ke, Kehui
    Chen, Chaojie
    [J]. GIGASCIENCE, 2022, 11
  • [4] The complete chloroplast genome of Artocarpus heterophyllus (Moraceae)
    Liu, Jin
    Niu, Ying-Feng
    Ni, Shu-Bang
    Liu, Zi-Yan
    Zheng, Cheng
    Shi, Chao
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 13 - 14
  • [5] The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships
    de Souza, Ueric Jose Borges
    dos Santos, Raissa Nunes
    de Araujo Filho, Renisson Neponuceno
    dos Santos, Gil Rodrigues
    Sarmento, Renato Almeida
    De Bellis, Fabien
    Campos, Fabricio Souza
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (08): : 2291 - 2293
  • [6] The complete chloroplast genome sequence of Artocarpus gomezianus (Moraceae) from Xishuangbanna, China
    Lin, Xinggu
    Lin, Tao
    Zhixia, Sun
    Priyadi, Arief
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2890 - 2892
  • [7] The complete chloroplast genome sequence of Ficus beipeiensis (Moraceae), an endemic and endangered plant in China
    Han, Fang
    Li, Jingling
    Yuan, Jing
    Yu, Jie
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 604 - 605
  • [8] The genetic structure and demographic history revealed by whole-genome resequencing provide insights into conservation of critically endangered Artocarpus nanchuanensis
    Xia, Changying
    Zuo, Youwei
    Xue, Tiantian
    Kang, Ming
    Zhang, Huan
    Zhang, Xiaoxia
    Wang, Binru
    Zhang, Jiabin
    Deng, Hongping
    [J]. FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [9] The complete chloroplast genome of the endangered tree Parashorea chinensis (Dipterocarpaceae)
    Zhu, Xing-Fu
    Sun, Yongshuai
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1163 - 1164
  • [10] Novel stilbenes from Artocarpus nanchuanensis
    Zhang, Pu-Zhao
    Gu, Jian
    Zhang, Guo-Lin
    [J]. JOURNAL OF ASIAN NATURAL PRODUCTS RESEARCH, 2015, 17 (03) : 217 - 223