PROGRESS IN COMPUTATIONAL STUDIES OF HOST-PATHOGEN INTERACTIONS

被引:33
|
作者
Zhou, Hufeng [1 ]
Jin, Jingjing [2 ]
Wong, Limsoon [2 ]
机构
[1] Natl Univ Singapore, NUS Grad Sch Integrat Sci & Engn, Singapore 117456, Singapore
[2] Natl Univ Singapore, Sch Comp, Singapore 117417, Singapore
关键词
Host-pathogen interaction; protein-protein interaction; PPI; infectious diseases; PROTEIN-PROTEIN INTERACTIONS; IMMUNODEFICIENCY-VIRUS TYPE-1; INTERACTION DATABASE; DATA INTEGRATION; DENGUE VIRUS; PHI-BASE; PREDICTION; IDENTIFICATION; DOMAIN; HIV-1;
D O I
10.1142/S0219720012300018
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Host-pathogen interactions are important for understanding infection mechanism and developing better treatment and prevention of infectious diseases. Many computational studies on host-pathogen interactions have been published. Here, we review recent progress and results in this field and provide a systematic summary, comparison and discussion of computational studies on host-pathogen interactions, including prediction and analysis of host-pathogen protein-protein interactions; basic principles revealed from host-pathogen interactions; and database and software tools for host-pathogen interaction data collection, integration and analysis.
引用
收藏
页数:26
相关论文
共 50 条
  • [1] Mathematical and computational approaches can complement experimental studies of host-pathogen interactions
    Kirschner, Denise E.
    Linderman, Jennifer J.
    [J]. CELLULAR MICROBIOLOGY, 2009, 11 (04) : 531 - 539
  • [2] Host-pathogen interactions
    Kaiser, P
    [J]. VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY, 2004, 100 (3-4) : 115 - 115
  • [3] Host-pathogen interactions
    Kaisho, Tsuneyasu
    Wagner, Hermann
    [J]. CURRENT OPINION IN IMMUNOLOGY, 2008, 20 (04) : 369 - 370
  • [4] Host-pathogen interactions
    Kaufmann, Stefan H. E.
    Walker, Bruce D.
    [J]. CURRENT OPINION IN IMMUNOLOGY, 2006, 18 (04) : 371 - 373
  • [5] Host-pathogen interactions
    Garcia-Sastre, Adolfo
    Sansonetti, Philippe J.
    [J]. CURRENT OPINION IN IMMUNOLOGY, 2010, 22 (04) : 425 - 427
  • [6] Host-Pathogen Interactions
    Shader, Richard I.
    [J]. CLINICAL THERAPEUTICS, 2019, 41 (10) : 1899 - 1901
  • [7] Computational prediction of host-pathogen protein-protein interactions
    Dyer, Matthew D.
    Murali, T. M.
    Sobral, Bruno W.
    [J]. BIOINFORMATICS, 2007, 23 (13) : I159 - I166
  • [8] Considering the host in host-pathogen interactions
    不详
    [J]. NATURE MICROBIOLOGY, 2024, : 1149 - 1149
  • [9] Growth and host-pathogen interactions
    Prentice, Andrew M.
    Darboe, Momodou K.
    [J]. WINDOW OF OPPORTUNITY: PRE-PREGNANCY TO 24 MONTHS OF AGE, 2008, 61 : 197 - 210
  • [10] Host-pathogen interactions in the cornea
    Suzuki, Takashi
    Yamada, Ai
    Gilmore, Michael S.
    [J]. JAPANESE JOURNAL OF OPHTHALMOLOGY, 2010, 54 (03) : 191 - 193