A core set of microsatellite markers identified for use in population genetic studies of Purple Swamphen (Porphyrio porphyrio)

被引：0
|
作者：
Subrata, S. A. [1 ]
Storch, I. [1 ]
机构：
[1] Univ Freiburg, Dept Wildlife Ecol & Management, D-79106 Freiburg, Germany
来源：
ANIMAL BIODIVERSITY AND CONSERVATION | 2012年 / 35卷 / 01期
关键词：
Microsatellites; Porphyrio; Wetland; Indonesia; AMPLIFICATION; SOFTWARE; RALLIDAE; BIRDS;
D O I：
暂无
中图分类号：
X176 [生物多样性保护];
学科分类号：
090705 ;
摘要：
A core set of microsatellite markers identified for use in population genetic studies of Purple Swamphen (Porphyrio porphyrio).- Populations of Purple Swamphen have been declining in some parts of the world due to wetland degradation and poaching. Conservation efforts might benefit from population genetic studies using microsatellite markers. Here we describe the selection of microsatellite markers suitable for such studies. We tested the markers against the evidence of the null alleles and gametic disequilibrium. From fourteen candidate loci, ten displayed a null alleles frequency of less than 0.2 and had no significant linkage disequilibrium. The selected loci showed no deviation from HWE and had a mean polymorphic information content of 0.516. Based on the test, we suggest these loci are suitable for population genetic studies of the species.
引用
收藏
页码：23 / 26
页数：4
相关论文
共 50 条
  • [1] STUDIES ON THE PURPLE SWAMPHEN, PORPHYRIO-PORPHYRIO, IN VICTORIA
    NORMAN, FI
    MUMFORD, L
    AUSTRALIAN WILDLIFE RESEARCH, 1985, 12 (02): : 263 - 278
  • [2] A core set of microsatellite markers for western corn rootworm (Coleoptera: Chrysomelidae) population genetics studies
    Kim, Kyung Seok
    Stolz, Uwe
    Miller, Nicholas J.
    Waits, Eric R.
    Guillemaud, Thomas
    Sumerford, Douglas V.
    Sappington, Thomas W.
    ENVIRONMENTAL ENTOMOLOGY, 2008, 37 (02) : 293 - 300
  • [3] A Set of Highly Polymorphic Microsatellite Markers for Genetic Diversity Studies in the Genus Origanum
    Alekseeva, Marina
    Rusanova, Mila
    Rusanov, Krasimir
    Atanassov, Ivan
    PLANTS-BASEL, 2023, 12 (04):
  • [4] Microsatellite markers for population genetic studies of the rock firefinch, Lagonosticta sanguinodorsalis
    Abalaka, Jacinta
    Hansson, Bengt
    AFRICAN ZOOLOGY, 2014, 49 (02) : 301 - 306
  • [5] Microsatellite DNA markers for population genetic studies in the dinoflagellate Karenia brevis
    Renshaw, Mark A.
    Soltysiak, Kelly
    Arreola, Daniel
    Loret, Pascal
    Patton, John C.
    Gold, John R.
    Campbell, Lisa
    MOLECULAR ECOLOGY NOTES, 2006, 6 (04): : 1157 - 1159
  • [6] Microsatellite markers for genetic population studies in Glossina palpalis (Diptera: Glossinidae)
    Solano, P
    Duvallet, G
    Dumas, V
    Cuisance, D
    Cuny, G
    ACTA TROPICA, 1997, 65 (03) : 175 - 180
  • [7] Microsatellite markers of Gonystylus bancanus (Thymelaeaceae) for population genetic studies and DNA fingerprinting
    Kevin Kit Siong Ng
    Soon Leong Lee
    Chin Hong Ng
    Lee Hong Tnah
    Chai Ting Lee
    Naoki Tani
    Conservation Genetics Resources, 2009, 1
  • [8] Microsatellite markers for population genetic studies of the blowfly Chrysomya putoria (Diptera: Calliphoridae)
    Rodrigues, Rosangela Aparecida
    Lima de Azeredo-Espin, Ana Maria
    Torres, Tatiana Teixeira
    MEMORIAS DO INSTITUTO OSWALDO CRUZ, 2009, 104 (07): : 1047 - 1050
  • [9] Microsatellite Markers for Population-Genetic Studies of Shiitake (Lentinula Edodes) Strains
    Kim, Ki-Hwan
    Kim, Yong-Yul
    Ka, Kang-Hyeon
    Lee, Hyoung-Seok
    Bak, Won-Chull
    Jeong, Suk-Ju
    Seong, Ji-Yeon
    Suh, Dong-Sang
    GENES & GENOMICS, 2009, 31 (06) : 403 - 411
  • [10] Utility of heterologous microsatellite markers for population genetic studies on tropical species of Asteraceae
    Weber, G. G.
    Lima, D. L.
    Pilati, L.
    Silverio, A.
    Da-Silva, P. R.
    GENETICS AND MOLECULAR RESEARCH, 2020, 19 (02): : 1 - 11
12345