Melatonin is known for its regulation of circadian rhythm. Recently, studies have shown that melatonin may have a positive effect on the skeleton. By increasing age, the melatonin levels decrease, which may lead to a further imbalanced bone remodeling. We aimed to investigate whether treatment with melatonin could improve bone mass and integrity in humans. In a double-blind RCT, we randomized 81 postmenopausal osteopenic women to 1-yr nightly treatment with melatonin 1mg (N=20), 3mg (N=20), or placebo (N=41). At baseline and after 1-yr treatment, we measured bone mineral density (BMD) by dual X-ray absorptiometry, quantitative computed tomography (QCT), and high-resolution peripheral QCT (HR-pQCT) and determined calciotropic hormones and bone markers. Mean age of the study subjects was 63 (range 56-73)yr. Compared to placebo, femoral neck BMD increased by 1.4% in response to melatonin (P<0.05) in a dose-dependent manner (P<0.01), as BMD increased by 0.5% in the 1mg/day group (P=0.55) and by 2.3% (P<0.01) in the 3mg/day group. In the melatonin group, trabecular thickness in tibia increased by 2.2% (P=0.04), and volumetric bone mineral density (vBMD) in the spine, by 3.6% (P=0.04) in the 3mg/day. Treatment did not significantly affect BMD at other sites or levels of bone turnover markers; however, 24-hr urinary calcium was decreased in response to melatonin by 12.2% (P=0.02). In conclusion, 1-yr treatment with melatonin increased BMD at femoral neck in a dose-dependent manner, while high-dose melatonin increased vBMD in the spine. Further studies are needed to assess the mechanisms of action and whether the positive effect of nighttime melatonin will protect against fractures.