Contrasting patterns of local adaptation along climatic gradients between a sympatric parasitic and autotrophic tree species

被引:10
|
作者
Walters, Sheree J. [1 ]
Robinson, Todd P. [2 ]
Byrne, Margaret [3 ,4 ]
Wardell-Johnson, Grant W. [1 ]
Nevill, Paul [1 ,5 ]
机构
[1] Curtin Univ, Sch Mol & Life Sci, ARC Ctr Mine Site Restorat, Perth, WA, Australia
[2] Curtin Univ, Sch Earth & Planetary Sci, Perth, WA, Australia
[3] Dept Biodivers Conservat & Attract, Biodivers & Conservat Sci, Perth, WA, Australia
[4] Curtin Univ, Sch Mol & Life Sci, Perth, WA, Australia
[5] Curtin Univ, Sch Mol & Life Sci, Trace & Environm DNA Lab, Perth, WA, Australia
基金
澳大利亚研究理事会;
关键词
comparative genomics; generalist parasite; genome scans; genotype-environment association; landscape genomics; parasitic species; GENOME SCANS; R-PACKAGE; SPATIAL PATTERN; PRACTICAL GUIDE; LANDSCAPE; SELECTION; BIODIVERSITY; MULTIVARIATE; ASSOCIATION; RESTORATION;
D O I
10.1111/mec.15537
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Sympatric tree species are subject to similar climatic drivers, posing a question as to whether they display comparable adaptive responses. However, no study has explicitly examined local adaptation of co-occurring parasitic and autotrophic plant species to the abiotic environment. Here we test the hypotheses that a generalist parasitic tree would display a weaker signal of selection and that genomic variation would associate with fewer climatic variables (particularly precipitation) but have similar spatial patterns to a sympatric autotrophic tree species. To test these hypotheses, we collected samples from 17 sites across the range of two tree species, the hemiparasiteNuytsia floribunda(n = 264) and sympatric autotrophMelaleuca rhaphiophylla(n = 272). We obtained 5,531 high-quality genome-wide single nucleotide polymorphisms (SNPs) forM. rhaphiophyllaand 6,727 SNPs forN. floribundausing DArTseq genome scan technology. Population differentiation and environmental association approaches were used to identify signals of selection. Generalized dissimilarly modelling was used to detect climatic and spatial patterns of local adaptation across climatic gradients. Overall, 322 SNPs were identified as putatively adaptive for the autotroph, while only 57 SNPs were identified for the parasitic species. We found genomic variation to associate with different sets of bioclimatic variables for each species, with precipitation relatively less important for the parasite. Spatial patterns of predicted adaptive variability were different and indicate that co-occurring species with disparate life history traits may not respond equally to selective pressures (i.e., temperature and precipitation). Together, these findings provide insight into local adaptation of sympatric parasitic and autotrophic tree species to abiotic environments.
引用
收藏
页码:3022 / 3037
页数:16
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