Genome-Wide Identification, Evolution, and Expression Pattern Analysis of the GATA Gene Family in Tartary Buckwheat (Fagopyrum tataricum)

被引:9
|
作者
Yao, Xin [1 ]
Zhou, Meiliang [2 ]
Ruan, Jingjun [1 ]
He, Ailing [1 ]
Ma, Chao [1 ]
Wu, Weijiao [1 ]
Lai, Dili [1 ,2 ]
Fan, Yu [1 ]
Gao, Anjing [1 ]
Weng, Wenfeng [1 ]
Cheng, Jianping [1 ]
机构
[1] Guizhou Univ, Coll Agron, Guiyang 550025, Peoples R China
[2] Chinese Acad Agr Sci, Inst Crop Sci, Beijing 100081, Peoples R China
基金
美国国家科学基金会;
关键词
Fagopyrum tataricum; GATA; genome-wide; development and evolution; expression patterns; TRANSCRIPTION FACTORS; ARABIDOPSIS-THALIANA; SIGNALING PATHWAYS; LIGHT; GNC; DOWNSTREAM; INTRONLESS; CYTOKININ; GNL/CGA1; RICE;
D O I
10.3390/ijms232012434
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
GATA is a transcription factor that exerts a vital function in plant growth and development, physiological metabolism, and environmental responses. However, the GATA gene family has rarely been studied in Tartary buckwheat since the completion of its genome. This study used bioinformatics methods to identify GATA genes of Tartary buckwheat and to analyze their subfamily classification, structural composition, and developmental evolution, as well as to discuss the expression patterns of FtGATA genes in different subfamilies. The twenty-eight identified FtGATA genes in the Tartary buckwheat genome were divided into four subfamilies and distributed on eight chromosomes. One pair of tandem repeat genes and eight pairs of fragments were found in chromosome mapping. Spatiotemporal expression patterns of eight FtGATA genes in different subfamilies indicated that the FtGATA gene family has regulatory roles in tissue specificity, fruit development, abiotic stress, and hormonal responses. This study creates a theoretical and scientific foundation for further research on the evolutionary relationship and biological function of FtGATA.
引用
收藏
页数:20
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