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Oleiharenicola alkalitolerans gen. nov., sp nov., a new member of the phylum Verrucomicrobia isolated from an oilsands tailings pond
被引:6
|作者:
Rochman, Fauziah F.
[1
]
Kim, Joong-Jae
[1
]
Rijpstra, W. Irene C.
[2
]
Damste, Jaap S. Sinninghe
[2
,3
]
Schumann, Peter
[4
]
Verbeke, Tobin J.
[1
]
Dunfield, Peter F.
[1
]
机构:
[1] Univ Calgary, Dept Biol Sci, Calgary, AB, Canada
[2] Univ Utrecht, Dept Marine Microbiol & Biogeochem, NIOZ Royal Netherlands Inst Sea Res, POB 59, NL-1790 AB Den Burg, Texel, Netherlands
[3] Univ Utrecht, Dept Earth Sci, Fac Geosci, POB 80-021, NL-3508 TA Utrecht, Netherlands
[4] Leibniz Inst DSMZ German Collect Microorganisms &, Braunschweig, Germany
基金:
加拿大自然科学与工程研究理事会;
欧洲研究理事会;
关键词:
oilsands tailings ponds;
alkalitolerant bacterium;
Verrucomicrobia;
Opitutaceae;
Oleiharenicola alkalitolerans;
SEQUENCE ALIGNMENT;
BACTERIA;
DIVERSITY;
DIVISION;
DATABASE;
SEAWATER;
ACID;
D O I:
10.1099/ijsem.0.002624
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
A novel member of the phylum Verrucomicrobia was isolated from an oilsands tailings pond in Alberta, Canada. Cells of isolate NVTT are Gram-negative, strictly aerobic, non-pigmented, non-motile cocci to diplococci 0.5-1.0 mu m in diameter. The bacterium is neutrophilic (optimum pH 6.0-8.0) but alkalitolerant, capable of growth between pH 5.5 and 11.0. The temperature range for growth is 15-40 degrees C (optimum 25-37 degrees C). Carbon and energy sources include sugars and organic acids. Nitrogen sources include nitrate, urea, L-glycine, L-alanine, L-proline and L-serine. Does not fix atmospheric nitrogen. Does not require NaCl and is inhibited at NaCl concentrations above 3.0% (w/v). The DNA G+Ccontent of strain NVTT, based on a draft genome sequence, is 66.1mol%. MK-6 and MK-7 are the major respiratory quinones. Major cellular fatty acids are anteiso-C-15:0 and iso-C-15:0. Phylogenetic analysis of 16S rRNA gene sequences revealed that the strain belongs to the family Opitutaceae of the phylum Verrucomicrobia. The most closely related validated species is Opitutus terrae (93.7% 16S rRNA gene sequence identity to its type strain PB90-1(T)). Based on genotypic, phenotypic and chemotaxonomic characteristics, it was concluded that this strain represents a novel genus and species, for which the name Oleiharenicola alkalitolerans gen. nov., sp. nov. is proposed. The type strain of this novel species is NVTT (=ATCC BAA-2697(T);=DSM 29249(T)).
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页码:1078 / 1084
页数:7
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