Enhancing Time-Series Detection Algorithms for Automated Biosurveillance

被引:34
|
作者
Tokars, Jerome I. [1 ]
Burkom, Howard [2 ]
Xing, Jian [1 ]
English, Roseanne [1 ]
Bloom, Steven [3 ]
Cox, Kenneth [4 ]
Pavlin, Julie A. [5 ]
机构
[1] Ctr Dis Control & Prevent, Atlanta, GA 30329 USA
[2] Johns Hopkins Univ, Baltimore, MD USA
[3] Sci Applicat Int Corp, San Diego, CA USA
[4] US Dept Def, Washington, DC 20305 USA
[5] Armed Forces Res Inst Med Sci, Bangkok 10400, Thailand
关键词
SYNDROMIC SURVEILLANCE;
D O I
10.3201/eid1504.080616
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
BioSense is a US national system that uses data from health information systems for automated disease surveillance. We studied 4 time-series algorithm modifications designed to improve sensitivity for detecting artificially added data. To test these modified algorithms, we used reports of daily syndrome visits from 308 Department of Defense (DoD) facilities and 340 hospital emergency departments (EDs). At a constant alert rate of 1%, sensitivity was improved for both datasets by using a minimum standard deviation (SD) of 1.0, a 14-28 day baseline duration for calculating mean and SD, and an adjustment for total clinic visits as a surrogate denominator. Stratifying baseline days into weekdays versus weekends to account for day-of-week effects increased sensitivity for the DoD data but not for the ED data. These enhanced methods may increase sensitivity without increasing the alert rate and may improve the ability to detect outbreaks by using automated surveillance system data.
引用
收藏
页码:533 / 539
页数:7
相关论文
共 50 条
  • [1] Automated time series forecasting for biosurveillance
    Burkom, Howard S.
    Murphy, Sean Patrick
    Shmueli, Galit
    [J]. STATISTICS IN MEDICINE, 2007, 26 (22) : 4202 - 4218
  • [2] Evaluation metrics for anomaly detection algorithms in time-series
    Kovacs, Gyorgy
    Sebestyen, Gheorghe
    Hangan, Anca
    [J]. ACTA UNIVERSITATIS SAPIENTIAE INFORMATICA, 2019, 11 (02) : 113 - 130
  • [3] Generic and Scalable Framework for Automated Time-series Anomaly Detection
    Laptev, Nikolay
    Amizadeh, Saeed
    Flint, Ian
    [J]. KDD'15: PROCEEDINGS OF THE 21ST ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 2015, : 1939 - 1947
  • [4] Comparison of trend detection algorithms in the analysis of physiological time-series data
    Melek, WW
    Lu, Z
    Kapps, A
    Fraser, WD
    [J]. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2005, 52 (04) : 639 - 651
  • [5] Workshop on Algorithms for Time-Series Analysis
    Protopapas, Pavlos
    [J]. NEW HORIZONS IN TIME-DOMAIN ASTRONOMY, 2012, (285): : 271 - 271
  • [6] OUTLIERS DETECTION IN TIME-SERIES
    LEE, AH
    HUI, YV
    [J]. JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION, 1993, 45 (1-2) : 77 - 95
  • [7] ON OUTLIER DETECTION IN TIME-SERIES
    LJUNG, GM
    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-METHODOLOGICAL, 1993, 55 (02): : 559 - 567
  • [8] AUTOMATED SELECTION OF APPROPRIATE TIME-SERIES MODEL
    Radek, Hrebik
    Jana, Seknickova
    [J]. PROCEEDINGS OF THE INTERNATIONAL CONFERENCE QUANTITATIVE METHODS IN ECONOMICS (MULTIPLE CRITERIA DECISION MAKING XVI), 2012, : 73 - 77
  • [9] Detection of causally anomalous time-series
    Apte, Manoj
    Vaishampayan, Sushodhan
    Palshikar, Girish Keshav
    [J]. INTERNATIONAL JOURNAL OF DATA SCIENCE AND ANALYTICS, 2021, 11 (02) : 141 - 153
  • [10] OUTLIER DETECTION AND TIME-SERIES MODELING
    ABRAHAM, B
    CHUANG, A
    [J]. TECHNOMETRICS, 1989, 31 (02) : 241 - 248