Loci for human leukocyte telomere length in the Singaporean Chinese population and trans-ethnic genetic studies

被引:57
|
作者
Dorajoo, Rajkumar [1 ]
Chang, Xuling [2 ,3 ]
Gurung, Resham Lal [4 ]
Li, Zheng [1 ]
Wang, Ling [1 ]
Wang, Renwei [5 ]
Beckman, Kenneth B. [6 ]
Adams-Haduch, Jennifer [5 ]
Yiamunaa, M. [4 ]
Liu, Sylvia [4 ]
Meah, Wee Yang [1 ]
Sim, Kar Seng [1 ]
Lim, Su Chi [4 ,7 ,8 ]
Friedlander, Yechiel [9 ]
Liu, Jianjun [1 ,10 ]
van Dam, Rob M. [8 ,10 ]
Yuan, Jian-Min [5 ,11 ]
Koh, Woon-Puay [8 ,12 ]
Khor, Chiea Chuen [1 ,13 ]
Heng, Chew-Kiat [2 ,3 ]
机构
[1] Agcy Sci Technol & Res, Genome Inst Singapore, Singapore 138672, Singapore
[2] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Paediat, Singapore 119228, Singapore
[3] Natl Univ Hlth Syst, Khoo Teck Puat Natl Univ Childrens Med Inst, Singapore 119074, Singapore
[4] Khoo Teck Puat Hosp, Clin Res Unit, Singapore 768828, Singapore
[5] Univ Pittsburgh, UPMC Hillman Canc Ctr, Div Canc Control & Populat Sci, Pittsburgh, PA 15232 USA
[6] Univ Minnesota, Genom Ctr, Minneapolis, MN 55455 USA
[7] Khoo Teck Puat Hosp, Diabet Ctr, Singapore 768828, Singapore
[8] Natl Univ Singapore, Saw Swee Hock Sch Publ Hlth, Singapore 117549, Singapore
[9] Hebrew Univ Jerusalem, Sch Publ Hlth & Community Med, IL-12272 Jerusalem, Israel
[10] Natl Univ Singapore, Yong Loo Lin Sch Med, Dept Med, Singapore 117597, Singapore
[11] Univ Pittsburgh, Grad Sch Publ Hlth, Dept Epidemiol, Pittsburgh, PA 15261 USA
[12] Duke NUS Med Sch Singapore, Hlth Syst & Serv Res, Singapore 169857, Singapore
[13] Singapore Natl Eye Ctr, Singapore Eye Res Inst, Singapore 169856, Singapore
基金
新加坡国家研究基金会; 美国国家卫生研究院; 英国医学研究理事会;
关键词
GENOME-WIDE ASSOCIATION; VARIANTS; COMPLEX; PARP1; RISK; HERITABILITY; INDIVIDUALS; DISEASES; ASIANS; HEALTH;
D O I
10.1038/s41467-019-10443-2
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Genetic factors underlying leukocyte telomere length (LTL) may provide insights into telomere homeostasis, with direct links to disease susceptibility. Genetic evaluation of 23,096 Singaporean Chinese samples identifies 10 genome-wide loci (P < 5 x 10(-8)). Several of these contain candidate genes (TINF2, PARP1, TERF1, ATM and POT1) with potential roles in telomere biology and DNA repair mechanisms. Meta-analyses with additional 37,505 European individuals reveals six more genome-wide loci, including associations at MPHOSPH6, NKX2-3 and TYMS. We demonstrate that longer LTL associates with protection against respiratory disease mortality [HR = 0.854(0.804-0.906), P=1.88 x 10(-7)] in the Singaporean Chinese samples. We further show that the LTL reducing SNP rs7253490 associates with respiratory infections (P= 7.44 x 10(-4)) although this effect may not be strongly mediated through LTL. Our data expands on the genetic basis of LTL and may indicate on a potential role of LTL in immune competence.
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页数:12
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