Ab initio crystal structure determination of three pharmaceutical compounds from X-ray powder diffraction data

被引:5
|
作者
Giovannini, J
Perrin, MA
Louër, D
Leveiller, F
机构
[1] Avenis Pharma, FR-94403 Vitry Sur Seine, France
[2] Univ Rennes 1, UMR 6511 CNRS, Chim Solide & Inorgan Mol Lab, FR-35042 Rennes, France
关键词
direct space methods; high-resolution X-ray powder diffraction; organic compound; pharmaceutical; powder pattern indexing; simulated annealing; structure solution;
D O I
10.4028/www.scientific.net/MSF.378-381.582
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
Crystal structures of drug compounds of increasing complexity have been solved ab initio from monochromatic X-ray diffraction data using a direct space approach. The geometry of the molecules introduced into the unit cell was optimised by quantum calculation. For structure solution, trial models were generated randomly using a simulated annealing algorithm. Torsion angles were allowed to vary simultaneously with translation and rotation of the molecular fragment within the cell. Provided that pattern indexing is solved and preferred orientation effects are minimised, the methodology can be applied almost routinely. A structure of a compound exhibiting a very high configurational flexibility has been solved recently (III). Examples reported are : I C14H14N3OCl C2/c V = 2512.5(3) Angstrom (3) 33 atoms 2 torsions R-wp = 7.72 % IIa C23H24N3O2SF P2(1) V = 1067.4(3) Angstrom (3) 54 atoms 5 torsions R-wp = 15.34 % IIb C23H24N3O2SF P-1 V= 1068.2(5) Angstrom (3) 54 atoms 5 torsions R-wp = 12.85 % III to be declassified P2(1) V = 2266.2(7) Angstrom (3) 117 atoms 18 torsions R-wp = 11.71 %.
引用
收藏
页码:582 / 587
页数:6
相关论文
共 50 条
  • [1] Ab initio structure determination of a peptide β-turn from powder X-ray diffraction data
    Tedesco, E
    Harris, KDM
    Johnston, RL
    Turner, GW
    Raja, KMP
    Balaram, P
    [J]. CHEMICAL COMMUNICATIONS, 2001, (16) : 1460 - +
  • [2] Ab initio structure determination via powder X-ray diffraction
    Digamber G. Porob
    T. N. Guru Row
    [J]. Journal of Chemical Sciences, 2001, 113 (5-6) : 435 - 444
  • [3] Ab initio structure determination via powder X-ray diffraction
    Porob, DG
    Row, TNG
    [J]. PROCEEDINGS OF THE INDIAN ACADEMY OF SCIENCES-CHEMICAL SCIENCES, 2001, 113 (5-6): : 435 - 444
  • [4] Ab initio crystal structure determination of two chain functionalized pyrroles from synchrotron X-ray powder diffraction data
    da Silva, Ivan
    Lopez-Tosco, Sara
    Tejedor, David
    Garcia-Tellado, Fernando
    Gonzalez-Platas, Javier
    [J]. POWDER DIFFRACTION, 2012, 27 (03) : 172 - 178
  • [5] Crystal structure determination from X-ray powder diffraction data
    Tremayne, Maryjane
    [J]. ENGINEERING OF CRYSTALLINE MATERIALS PROPERTIES: STATE OF THE ART IN MODELING, DESIGN AND APPLICATIONS, 2008, : 477 - 493
  • [6] Ab initio structure determination of ammonium hydrogen alkyl phosphates from X-ray powder diffraction data
    Neels, A
    Stoeckli-Evans, H
    Neels, J
    Clearfield, A
    Poojary, D
    [J]. ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1998, 54 : 478 - 484
  • [7] Ab initio structure determination of sulfathiazole polymorph V from synchrotron X-ray powder diffraction data
    Chan, FC
    Anwar, J
    Cernik, R
    Barnes, P
    Wilson, RM
    [J]. JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1999, 32 : 436 - 441
  • [8] Ab Initio Structure Determination of Anhydrous Sodium Alendronate from Laboratory Powder X-Ray Diffraction Data
    Asnani, Minakshi
    Vyas, K.
    Bhattacharya, Apurba
    Devarakonda, Surya
    Chakraborty, Santu
    Mukherjee, Alok Kumar
    [J]. JOURNAL OF PHARMACEUTICAL SCIENCES, 2009, 98 (06) : 2113 - 2121
  • [9] Unknown crystal structure determination from X-ray powder diffraction data
    Shi, Y
    Liang, JK
    Liu, QL
    Chen, XL
    [J]. SCIENCE IN CHINA SERIES A-MATHEMATICS PHYSICS ASTRONOMY, 1998, 41 (02): : 191 - 197
  • [10] The limits to the determination of crystal structure from powder X-ray diffraction data
    Solans, X
    [J]. EPDIC 7: EUROPEAN POWDER DIFFRACTION, PTS 1 AND 2, 2001, 378-3 : 80 - 85