Virtual screening, ADMET profiling, molecular docking and dynamics approaches to search for potent selective natural molecules based inhibitors against metallothionein-III to study Alzheimer's disease

被引:28
|
作者
Roy, Sudeep [1 ]
Kumar, Akhil [2 ]
Baig, Mohd Hassan [3 ]
Masarik, Michal [4 ]
Provaznik, Ivo [5 ,6 ]
机构
[1] Brno Univ Technol, Fac Elect Engn & Commun, Dept Biomed Engn, Tech 12, Brno 61200, Czech Republic
[2] CSIR, Div Biotechnol, Cent Inst Med & Aromat Plants, Lucknow 226015, Uttar Pradesh, India
[3] Yeungnam Univ, Sch Biotechnol, Kyongsan 712749, South Korea
[4] Masaryk Univ, Fac Med, Dept Pathol Physiol, Brno 62500, Czech Republic
[5] Brno Univ Technol, Int Clin Res Ctr, Ctr Biomed Engn, St Annes Univ Hosp Brno, Brno 61200, Czech Republic
[6] Brno Univ Technol, Dept Biomed Engn, FEEC, Brno 61200, Czech Republic
关键词
Alzheimer's disease; Metallothionein-III; Virtual screening; ADMET; Molecular dynamics; IN-SILICO; AQUEOUS SOLUBILITY; PREDICTION; BRAIN; BINDING; CLASSIFICATION; PENETRATION; ABSORPTION; SIMULATION; MODELS;
D O I
10.1016/j.ymeth.2015.04.021
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Motivation: Metallothionein-III (MT-III) displays neuro-inhibitory activity and is involved in the repair of neuronal damage. An altered expression level of MT-III suggests that it could be a mitigating factor in Alzheimer's disease (AD) neuronal dysfunction. Currently there are limited marketed drugs available against MT-III. The inhibitors are mostly pseudo-peptide based with limited ADMET. In our present study, available database InterBioScreen (natural compounds) was screened out for MT-III. Pharmacodynamics and pharmacokinetic studies were performed. Molecular docking and simulations of top hit molecules were performed to study complex stability. Results: Study reveals potent selective molecules that interact and form hydrogen bonds with amino acids Ser-6 and Lys-22 are common to established melatonin inhibitors for MT-III. These include DMHMIO, MCA B and s27533 derivatives. The ADMET profiling was better with comparable interaction energy values. It includes properties like blood brain barrier, hepatotoxicity, druggability, mutagenicity and carcinogenicity. Molecular dynamics studies were performed to validate our findings. (C) 2015 Published by Elsevier Inc.
引用
收藏
页码:105 / 110
页数:6
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