Objectives: Lung adenocarcinomas are a heterogeneous set of diseases with distinct genetic and histologic characteristics. Besides the discovery of oncogenic mutations and introduction of the histologic classifications (2011 International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society and 2015 WHO), increasing evidence has linked this intertumor heterogeneity to the lung lineage-specific pathways and lineage genes. Therefore, in this study, we assessed the gene expression of identified lung lineage genes to study their role in distinguishing lung adenocarcinoma diversities. Methods: A total of 278 surgically resected lung adenocarcinomas were included. Each case was evaluated for genetic mutations and histologic classification. Lineage genes associated with respiratory tract differentiation (NK2 homeobox 1 gene [NKX2-1], GATA protein binding 6 gene [GATA6], foxhead box J1 gene [FOXJ1], and SAM pointed domain containing ETS transcription factor gene [SPDEF]) and stem/basal-like status (inhibitor of DNA binding 2, HLH protein gene [ID2], POU class 5 homeobox 1 gene [POU5F1], SRY-box 2 gene [SOX2], and v-myc avian myelocytomatosis viral oncogene homolog gene [MYC]) were selected. mRNA expression of these genes in each tumor sample was assessed by quantitative real-time polymerase chain reaction and normalized to paired normal lung tissue. Results: Distinct lineage gene expressions were found on the basis of genetic and histologic diversities. Expression of NKX2-1, GATA6, FOXJ1, and POU5F1 exhibited a significant linear relationship across histologic subgroups that was independent of genetic mutation status. Expression levels of NKX2-1 and POU5F1 were also associated with EGFR mutation status, independent of histologic subtypes. Further analysis revealed that the overexpression of SPDEF defined longer relapse-free survivals, especially in stage I disease. Conclusions: For the first time, we showed the unique lineage backgrounds of different histologic subtypes and oncogenic mutations. Assessing this added parameter might be beneficial in discriminating intertumor heterogeneity, advancing target exploration, developing theranostic/prognostic biomarkers, and designing clinical trials. (C) 2016 International Association for the Study of Lung Cancer. Published by Elsevier Inc. All rights reserved.
机构:
Univ Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Kim, Il-Jin
Quigley, David
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Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Quigley, David
To, Minh D.
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Univ Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
To, Minh D.
Pham, Patrick
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Univ Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Pham, Patrick
Lin, Kevin
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Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Lin, Kevin
Jo, Brian
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Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Jo, Brian
Jen, Kuang-Yu
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Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Jen, Kuang-Yu
Raz, Dan
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Univ Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Raz, Dan
Kim, Jae
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Univ Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Kim, Jae
Mao, Jian-Hua
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Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Div Life Sci, Berkeley, CA 94720 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Mao, Jian-Hua
Jablons, David
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Univ Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
Jablons, David
Balmain, Allan
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Univ Calif San Francisco, Helen Diller Family Canc Ctr, San Francisco, CA 94143 USA
Univ Calif San Francisco, Dept Biochem & Biophys, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Surg, Thorac Oncol Lab, San Francisco, CA 94115 USA
机构:
Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Nishino, Michiya
Klepeis, Veronica E.
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Klepeis, Veronica E.
Yeap, Beow Y.
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Harvard Univ, Sch Med, Boston, MA USA
Massachusetts Gen Hosp, Dept Med, Boston, MA 02114 USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Yeap, Beow Y.
Bergethon, Kristin
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Bergethon, Kristin
Morales-Oyarvide, Vicente
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Morales-Oyarvide, Vicente
Dias-Santagata, Dora
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Dias-Santagata, Dora
Yagi, Yukako
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Yagi, Yukako
Mark, Eugene J.
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Mark, Eugene J.
Iafrate, A. John
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Iafrate, A. John
Mino-Kenudson, Mari
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Massachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Boston, MA USAMassachusetts Gen Hosp, Dept Pathol, Boston, MA 02114 USA