Comparative genomics of pectinacetylesterases: Insight on function and biology

被引:13
|
作者
de Souza, Amancio Jose [1 ]
Pauly, Markus [1 ]
机构
[1] Univ Calif Berkeley, Dept Plant & Microbial Biol, Energy Biosci Inst, Berkeley, CA 94720 USA
关键词
cell walls; pectin; pectinacetylesterases; comparative genomics; phylogeny; acetylation; IDENTIFICATION; ACETYLATION; PECTINS;
D O I
10.1080/15592324.2015.1055434
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pectin acetylation influences the gelling ability of this important plant polysaccharide for the food industry. Plant apoplastic pectinacetylesterases (PAEs) play a key role in regulating the degree of pectin acetylation and modifying their expression thus represents one way to engineer plant polysaccharides for food applications. Identifying the major active enzymes within the PAE gene family will aid in our understanding of this biological phenomena as well as provide the tools for direct trait manipulation. Using comparative genomics we propose that there is a minimal set of 4 distinct PAEs in plants. Possible functional diversification of the PAE family in the grasses is also explored with the identification of 3 groups of PAE genes specific to grasses.
引用
收藏
页数:5
相关论文
共 50 条
  • [1] Insight into Hyalomma anatolicum biology by comparative genomics analyses
    Wang, Jinming
    Chai, Yijun
    Yang, Jifei
    Chen, Kai
    Liu, Guangyuan
    Luo, Jianxun
    Guan, Guiquan
    Ren, Qiaoyun
    Yin, Hong
    [J]. INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2024, 54 (3-4) : 157 - 170
  • [2] Comparative genomics and evolutionary biology
    Kondrashov, AS
    [J]. CURRENT OPINION IN GENETICS & DEVELOPMENT, 1999, 9 (06) : 624 - 629
  • [3] COMPARATIVE BIOLOGY - THE GENOMICS GENERATION
    OBRIEN, SJ
    [J]. CURRENT BIOLOGY, 1993, 3 (06) : 395 - 397
  • [4] Comparative genomics and understanding of microbial biology
    Fraser, CM
    Eisen, J
    Fleischmann, RD
    Ketchum, KA
    Peterson, S
    [J]. EMERGING INFECTIOUS DISEASES, 2000, 6 (05) : 505 - 512
  • [5] Comparative genomics: A new integrative biology
    Robbins, RJ
    [J]. INTEGRATIVE APPROACHES TO MOLECULAR BIOLOGY, 1996, : 63 - 90
  • [6] Comparative Genomics Provides Insight into the Function of Broad-Host Range Sponge Symbionts
    Waterworth, Samantha C.
    Parker-Nance, Shirley
    Kwan, Jason C.
    Dorrington, Rosemary A.
    [J]. MBIO, 2021, 12 (05):
  • [7] Comparative Genomics of Trace Element Dependence in Biology
    Zhang, Yan
    Gladyshev, Vadim N.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (27) : 23623 - 23629
  • [8] Population Biology and Comparative Genomics of Campylobacter Species
    Epping, Lennard
    Antao, Esther-Maria
    Semmler, Torsten
    [J]. FIGHTING CAMPYLOBACTER INFECTIONS: TOWARDS A ONE HEALTH APPROACH, 2021, 431 : 59 - 78
  • [9] Comparative Genomics A Powerful New Tool in Biology
    Bachhawat, Anand K.
    [J]. RESONANCE-JOURNAL OF SCIENCE EDUCATION, 2006, 11 (08): : 22 - 40
  • [10] Annelids in evolutionary developmental biology and comparative genomics
    Mcdougall, C.
    Hui, J. H. L.
    Monteiro, A.
    Takahashi, T.
    Ferrier, D. E. K.
    [J]. PARASITE, 2008, 15 (03) : 321 - 328