Planktonic dinoflagellate records for New Zealand are substantial due to intense monitoring programmes that have taken place on behalf of New Zealand's biotoxin regulators and the shellfish industry since 1993. At that time a Karenia bloom caused human illnesses and shellfish harvesting ceased until monitoring was instigated. Phytoplankton records are based on morphological identification using light microscopy but are backed up by government funded research programmes which implement techniques such as electron microscopy, DNA sequencing, molecular detection assays and high throughput sequencing of environmental DNA. This checklist will support management of aquaculture industries, recreational shellfish harvests and environmental health initiatives. Somegenera are considered benthic or epiphytic, but have lengthy planktonic life stages. Forty-five genera in the class Dinophyceae Fritsch are reported: Akashiwo, Alexandrium, Amphidinium, Amylax, Azadinium, Biecheleria, Bysmatrum, Cachonina, Cochlodinium (synonym: Margalefidinium), Coolia, Dicroerisma, Dinophysis, Diploneis, Diplopsalis, Fragilidium, Glenodinium, Gonyaulax, Gymnodinium, Gyrodinium, Heterocapsa, Karenia, Karlodinium, Lepidodinium, Lingulodinium, Margalefidinium, Ostreopsis, Oxyphysis, Pelagodinium, Pentapharsodinium, Phalacroma, Podolampas, Polarella, Polykrikos, Prorocentrum, Protodinium, Protoodinium, Protoperidinium, Pseliodinium, Scrippsiella, Takayama, Togula, Torodinium, Tripos, Vulcanodinium, Wolosynska. Other genera belonging to the Infraphylum Dinoflagellata also occur in New Zealand waters. They are not in the list but include Noctiluca, Pronoctiluca and Spatulodinium (Class: Noctilucophyceae) and Oxyrrhis (Class: Oxyrrhidophyceae).