CrystalCMP: an easy-to-use tool for fast comparison of molecular packing

被引:83
|
作者
Rohlicek, Jan [1 ]
Skorepova, Eliska [2 ]
Babor, Martin [2 ]
Cejka, Jan [2 ]
机构
[1] Acad Sci Czech Republic, Inst Phys, Dept Struct Anal, Na Slovance 2, Prague 18221 8, Czech Republic
[2] Univ Chem & Technol Prague, Dept Solid State Chem, Tech 5, Prague 16628 6, Czech Republic
关键词
comparison; similarity; packing; crystal structure; computer programs; TROSPIUM CHLORIDE; BENZAMIDE; SIMILARITY; POLYMORPHISM; CABERGOLINE; COCRYSTALLIZATION; CRYSTALLOGRAPHY; ALGORITHMS; FEATURES; SETS;
D O I
10.1107/S1600576716016058
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A new approach is introduced for the comparison of molecular packing and the identification of identical crystal structure motifs. It has been tested on data sets for the solid forms of benzamide, cabergoline and trospium. In this approach, the packing similarity is calculated using a simple formula involving the distances between molecular centres and the relative orientations of molecular entities inside a finite molecular cluster. The approach is independent of the atomic labelling, the unit-cell parameters, the space group setting and the number of molecules in the asymmetric part of the unit cell. Owing to its low sensitivity to volume changes, this approach allows the comparison of various solid forms (such as polymorphs, hydrates, solvates, co-crystals or salts) of identical or similar molecular compounds. The method is also suitable for identifying similar results from direct space methods, which are often used in powder diffraction.
引用
收藏
页码:2172 / 2183
页数:12
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