Evaluating the Quality of Graph Embeddings via Topological Feature Reconstruction

被引:0
|
作者
Bonner, Stephen [1 ]
Brennan, John [1 ]
Kureshi, Ibad [1 ]
Theodoropoulos, Georgios [3 ]
McGough, Andrew Stephen [2 ]
Obara, Boguslaw [1 ]
机构
[1] Univ Durham, Dept Comp Sci, Durham, England
[2] Newcastle Univ, Sch Comp, Newcastle, England
[3] SUSTech, Sch Comp Sci & Engn, Shenzhen, Peoples R China
基金
英国工程与自然科学研究理事会;
关键词
graph embeddings; feature learning; deep learning;
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
In this paper we study three state-of-the-art, but competing, approaches for generating graph embeddings using unsupervised neural networks. Graph embeddings aim to discover the 'best' representation for a graph automatically and have been applied to graphs from numerous domains, including social networks. We evaluate their effectiveness at capturing a good representation of a graph's topological structure by using the embeddings to predict a series of topological features at the vertex level. We hypothesise that an 'ideal' high quality graph embedding should be able to capture key parts of the graph's topology, thus we should be able to use it to predict common measures of the topology, for example vertex centrality. This could also be used to better understand which topological structures are truly being captured by the embeddings. We first review these three graph embedding techniques and then evaluate how close they are to being 'ideal'. We provide a framework, with extensive experimental evaluation on empirical and synthetic datasets, to assess the effectiveness of several approaches at creating graph embeddings which capture detailed topological structure.
引用
收藏
页码:2691 / 2700
页数:10
相关论文
共 50 条
  • [1] Reconstruction of multiplex networks via graph embeddings
    Kaiser, Daniel
    Patwardhan, Siddharth
    Kim, Minsuk
    Radicchi, Filippo
    PHYSICAL REVIEW E, 2024, 109 (02)
  • [2] How Much Topological Structure Is Preserved by Graph Embeddings?
    Liu, Xin
    Zhuang, Chenyi
    Murata, Tsuyoshi
    Kim, Kyoung-Sook
    Kertkeidkachorn, Natthawut
    COMPUTER SCIENCE AND INFORMATION SYSTEMS, 2019, 16 (02) : 597 - 614
  • [3] TopoDetect: Framework for topological features detection in graph embeddings
    Haddad, Maroun
    Bouguessa, Mohamed
    SOFTWARE IMPACTS, 2021, 10
  • [4] Faster Graph Embeddings via Coarsening
    Fahrbach, Matthew
    Goranci, Gramoz
    Peng, Richard
    Sachdeva, Sushant
    Wang, Chi
    25TH AMERICAS CONFERENCE ON INFORMATION SYSTEMS (AMCIS 2019), 2019,
  • [5] Faster Graph Embeddings via Coarsening
    Fahrbach, Matthew
    Goranci, Gramoz
    Peng, Richard
    Sachdeva, Sushant
    Wang, Chi
    INTERNATIONAL CONFERENCE ON MACHINE LEARNING, VOL 119, 2020, 119
  • [6] GFCNet: Utilizing graph feature collection networks for coronavirus knowledge graph embeddings
    Xie, Zhiwen
    Zhu, Runjie
    Liu, Jin
    Zhou, Guangyou
    Huang, Jimmy Xiangji
    Cui, Xiaohui
    INFORMATION SCIENCES, 2022, 608 : 1557 - 1571
  • [7] GFCNet: Utilizing graph feature collection networks for coronavirus knowledge graph embeddings
    Xie, Zhiwen
    Zhu, Runjie
    Liu, Jin
    Zhou, Guangyou
    Huang, Jimmy Xiangji
    Cui, Xiaohui
    Information Sciences, 2022, 608 : 1557 - 1571
  • [8] Enhancing Graph Kernels via Successive Embeddings
    Nikolentzos, Giannis
    Vazirgiannis, Michalis
    CIKM'18: PROCEEDINGS OF THE 27TH ACM INTERNATIONAL CONFERENCE ON INFORMATION AND KNOWLEDGE MANAGEMENT, 2018, : 1583 - 1586
  • [9] Evaluating the Calibration of Knowledge Graph Embeddings for Trustworthy Link Prediction
    Safavi, Tara
    Koutra, Danai
    Meij, Edgar
    PROCEEDINGS OF THE 2020 CONFERENCE ON EMPIRICAL METHODS IN NATURAL LANGUAGE PROCESSING (EMNLP), 2020, : 8308 - 8321
  • [10] Evaluating Self-Supervised Learning for Molecular Graph Embeddings
    Wang, Hanchen
    Kaddour, Jean
    Liu, Shengchao
    Tang, Jian
    Lasenby, Joan
    Liu, Qi
    ADVANCES IN NEURAL INFORMATION PROCESSING SYSTEMS 36 (NEURIPS 2023), 2023,