An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia

被引:6
|
作者
Ledien, Julia [1 ]
Souv, Kimsan [1 ,2 ]
Leang, Rithea [2 ]
Huy, Rekol [2 ]
Cousien, Anthony [1 ,3 ]
Peas, Muslim [1 ]
Froehlich, Yves [1 ]
Duboz, Raphael [1 ,4 ]
Ong, Sivuth [5 ]
Duong, Veasna [5 ]
Buchy, Philippe [6 ]
Dussart, Philippe [5 ]
Tarantola, Arnaud [1 ,7 ]
机构
[1] Inst Pasteur Cambodge, Epidemiol & Publ Hlth Unit, Phnom Penh, Cambodia
[2] CNM, Phnom Penh, Cambodia
[3] Inst Pasteur, Math Modelling Infect Dis Lab, Paris, France
[4] INRA, CIRAD, ASTRE, UMR, Montpellier, France
[5] Inst Pasteur Cambodge, Virol Unit, Phnom Penh, Cambodia
[6] GlaxoSmithKline, Vaccines R&D, Singapore, Singapore
[7] Inst Pasteur Nouvelle Caledonie, Epidemiol Unit, Noumea, New Caledonia
来源
PLOS ONE | 2019年 / 14卷 / 02期
关键词
BURDEN;
D O I
10.1371/journal.pone.0212003
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends but the sensitivity of the early warning and time-lag to usefully inform hospitals can be improved. During The ECOnomic development, ECOsystem MOdifications, and emerging infectious diseases Risk Evaluation (ECOMORE) project's knowledge translation platforms, Cambodian hospital staff requested an early warning tool to prepare for major outbreaks. Our objective was therefore to find adapted tools to improve the early warning system and preparedness. Dengue data was provided by the National Dengue Control Program (NDCP) and are routinely obtained through passive surveillance. The data were analyzed at the provincial level for eight Cambodian provinces during 2008-2015. The R surveillance package was used for the analysis. We evaluated the effectiveness of Bayesian algorithms to detect outbreaks using count data series, comparing the current count to an expected distribution obtained from observations of past years. The analyses bore on 78,759 patients with dengue-like syndromes. The algorithm maximizing sensitivity and specificity for the detection of major dengue outbreaks was selected in each province. The overall sensitivity and specificity were 73% and 97%, respectively, for the detection of significant outbreaks during 2008-2015. Depending on the province, sensitivity and specificity ranged from 50% to 100% and 75% to 100%, respectively. The final algorithm meets clinicians' and decisionmakers' needs, is cost-free and is easy to implement at the provincial level.
引用
收藏
页数:11
相关论文
共 50 条
  • [1] A comparison of Zika and dengue outbreaks using national surveillance data in the Dominican Republic
    Bowman, Leigh R.
    Rocklov, Joacim
    Kroeger, Axel
    Olliaro, Piero
    Skewes, Ronald
    [J]. PLOS NEGLECTED TROPICAL DISEASES, 2018, 12 (11):
  • [2] National dengue surveillance, Cambodia 2002-2020
    Yek, Christina
    Li, Yimei
    Pacheco, Andrea R.
    Lon, Chanthap
    Duong, Veasna
    Dussart, Philippe
    Young, Katherine I.
    Chea, Sophana
    Lay, Sreyngim
    Man, Somnang
    Kimsan, Souv
    Huch, Chea
    Leang, Rithea
    Huy, Rekol
    Brook, Cara E.
    Manning, Jessica E.
    [J]. BULLETIN OF THE WORLD HEALTH ORGANIZATION, 2023, 101 (09) : 605 - 616
  • [3] Prediction of Dengue Outbreaks Based on Disease Surveillance and Meteorological Data
    Ramadona, Aditya Lia
    Lazuardi, Lutfan
    Hii, Yien Ling
    Holmner, Asa
    Kusnanto, Hari
    Rocklov, Joacim
    [J]. PLOS ONE, 2016, 11 (03):
  • [4] Hotspot Detection of Dengue Fever Outbreaks Using DBSCAN Algorithm
    Nandana, G. M.
    Mala, Shuchi
    Rawat, Ashok
    [J]. 2019 9TH INTERNATIONAL CONFERENCE ON CLOUD COMPUTING, DATA SCIENCE & ENGINEERING (CONFLUENCE 2019), 2019, : 158 - 161
  • [5] Under-recognition and reporting of dengue in Cambodia: a capture-recapture analysis of the National Dengue Surveillance System
    Vong, S.
    Goyet, S.
    Ly, S.
    Ngan, C.
    Huy, R.
    Duong, V.
    Wichmann, O.
    Letson, G. W.
    Margolis, H. S.
    Buchy, P.
    [J]. EPIDEMIOLOGY AND INFECTION, 2012, 140 (03): : 491 - 499
  • [6] Prediction of dengue outbreaks based on disease surveillance, meteorological and socio-economic data
    Jain, Raghvendra
    Sontisirikit, Sra
    Iamsirithaworn, Sopon
    Prendinger, Helmut
    [J]. BMC INFECTIOUS DISEASES, 2019, 19 (1)
  • [7] Prediction of dengue outbreaks based on disease surveillance, meteorological and socio-economic data
    Raghvendra Jain
    Sra Sontisirikit
    Sopon Iamsirithaworn
    Helmut Prendinger
    [J]. BMC Infectious Diseases, 19
  • [8] Evaluating spatial surveillance: detection of known outbreaks in real data
    Kleinman, K
    Abrams, A
    Yih, WK
    Platt, R
    Kulldorff, M
    [J]. STATISTICS IN MEDICINE, 2006, 25 (05) : 755 - 769
  • [9] Early Detection of Dengue Fever Outbreaks Using a Surveillance App (Mozzify): Cross-sectional Mixed Methods Usability Study
    Herbuela, Von Ralph Dane Marquez
    Karita, Tomonori
    Carvajal, Thaddeus Marzo
    Ho, Howell Tsai
    Lorena, John Michael Olea
    Regalado, Rachele Arce
    Sobrepena, Girly Dirilo
    Watanabe, Kozo
    [J]. JMIR PUBLIC HEALTH AND SURVEILLANCE, 2021, 7 (03):
  • [10] A statistical algorithm for the early detection of outbreaks of infectious disease
    Farrington, CP
    Andrews, NJ
    Beale, AD
    Catchpole, MA
    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES A-STATISTICS IN SOCIETY, 1996, 159 : 547 - 563