Modeling and analyzing higher-order correlations in non-Poissonian spike trains

被引:9
|
作者
Reimer, Imke C. G. [1 ,2 ]
Staude, Benjamin [1 ,2 ]
Ehm, Werner [3 ]
Rotter, Stefan [1 ,2 ]
机构
[1] Univ Freiburg, Bernstein Ctr Freiburg, D-79106 Freiburg, Germany
[2] Univ Freiburg, Fac Biol, D-79106 Freiburg, Germany
[3] Inst Frontier Areas Psychol & Mental Hlth, Freiburg, Germany
关键词
Multiple single-unit spike trains; Surrogate data; Calibration of correlation measures; CORTICAL ACTIVITY; FIRING PATTERNS; UNITARY EVENTS; GENERATION; SPARSE; STATISTICS; VARIABILITY; MECHANISMS; ENSEMBLES; DYNAMICS;
D O I
10.1016/j.jneumeth.2012.04.015
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Measuring pairwise and higher-order spike correlations is crucial for studying their potential impact on neuronal information processing. In order to avoid misinterpretation of results, the tools used for data analysis need to be carefully calibrated with respect to their sensitivity and robustness. This, in turn, requires surrogate data with statistical properties common to experimental spike trains. Here, we present a novel method to generate correlated non-Poissonian spike trains and study the impact of single-neuron spike statistics on the inference of higher-order correlations. Our method to mimic cooperative neuronal spike activity allows the realization of a large variety of renewal processes with controlled higher-order correlation structure. Based on surrogate data obtained by this procedure we investigate the robustness of the recently proposed method empirical de-Poissonization (Ehm et al., 2007). It assumes Poissonian spiking, which is common also for many other estimation techniques. We observe that some degree of deviation from this assumption can generally be tolerated, that the results are more reliable for small analysis bins, and that the degree of misestimation depends on the detailed spike statistics. As a consequence of these findings we finally propose a strategy to assess the reliability of results for experimental data. (C) 2012 Elsevier BM. All rights reserved.
引用
收藏
页码:18 / 33
页数:16
相关论文
共 50 条
  • [1] Optimizing Time Histograms for Non-Poissonian Spike Trains
    Omi, Takahiro
    Shinomoto, Shigeru
    [J]. NEURAL COMPUTATION, 2011, 23 (12) : 3125 - 3144
  • [2] Higher-order correlations in non-stationary parallel spike trains: statistical modeling and inference
    Benjamin Staude
    Stefan Rotter
    [J]. BMC Neuroscience, 10 (Suppl 1)
  • [3] Higher-order correlations in non-stationary parallel spike trains: statistical modeling and inference
    Staude, Benjamin
    Gruen, Sonja
    Rotter, Stefan
    [J]. FRONTIERS IN COMPUTATIONAL NEUROSCIENCE, 2010, 4
  • [4] Testing for higher-order correlations in massively parallel spike trains
    Benjamin Staude
    Stefan Rotter
    Sonja Grün
    [J]. BMC Neuroscience, 8 (Suppl 2)
  • [5] CuBIC: cumulant based inference of higher-order correlations in massively parallel spike trains
    Staude, Benjamin
    Rotter, Stefan
    Gruen, Sonja
    [J]. JOURNAL OF COMPUTATIONAL NEUROSCIENCE, 2010, 29 (1-2) : 327 - 350
  • [6] CuBIC: cumulant based inference of higher-order correlations in massively parallel spike trains
    Benjamin Staude
    Stefan Rotter
    Sonja Grün
    [J]. Journal of Computational Neuroscience, 2010, 29 : 327 - 350
  • [7] A Frank mixture copula family for modeling higher-order correlations of neural spike counts
    Onken, Arno
    Obermayer, Klaus
    [J]. INTERNATIONAL WORKSHOP ON STATISTICAL-MECHANICAL INFORMATICS 2009 (IW-SMI 2009), 2009, 197
  • [8] Surrogate-based detection of higher order correlations in parallel spike trains
    Louis, Sebastien
    Gruen, Sonja
    [J]. NEUROSCIENCE RESEARCH, 2009, 65 : S133 - S133
  • [9] Estimating time-dependent higher-order interactions in parallel spike trains
    Shimazaki, Hideaki
    Gruen, Sonja
    [J]. NEUROSCIENCE RESEARCH, 2008, 61 : S140 - S140
  • [10] Suppression of non-Poissonian shot noise by Coulomb correlations in ballistic conductors
    Bulashenko, OM
    Rubí, JM
    Kochelap, VA
    [J]. PHYSICAL REVIEW B, 2000, 62 (12) : 8184 - 8191