Genetic diversity assessment in Portugal accessions of Olea europaea by RAPD markers

被引:25
|
作者
Cordeiro, A. I. [2 ]
Sanchez-Sevilla, J. F. [3 ]
Alvarez-Tinaut, M. C. [1 ]
Gomez-Jimenez, M. C. [1 ]
机构
[1] Univ Extremadura, Dept Biol & Prod Vegetales, Area Fisiol Vegetal, Fac Ciencias, E-06071 Badajoz, Spain
[2] ENMP INIAP, Dept Olivicultura, P-7350951 Elvas, Portugal
[3] IFAPA CICE Junta Andalucia, Lab Bioquim, Dept Agr Litoral, Malaga, Spain
关键词
olive cultivars; UPGMA;
D O I
10.1007/s10535-008-0125-1
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Eighty seven olive (Olea europaea ssp. sativa L.) cultivar accessions from Portugal were characterized by means of randomly amplified polymorphic DNA (RAPD) markers. Of the 11 arbitrary 10-mer primers tested a total of 92 polymorphic bands were obtained, representing 87.6 % of the total amplification products. Twenty nine different genotypes were clearly discriminated. Differences were not found among the amplification profiles from different individuals of the same cultivar. All the genotypes could be identified by the combination of three primers: OPR-1, OPK-14 and OPA-1, seven genotype-specific markers being detected. Genetic relationships were estimated by the unweighted pair-group method with arithmetic averaging (UPGMA). The genetic analysis of the results showed a gradual distance between the various cultivars, making it difficult to identify well-differentiated phylogenetic groups, although two clusters were distinguishable with 35 % similarity, in addition to three independent branches with lower similarity: Galega, Tentilheira and Redondal. The dendrogram reflect some relationships for most of the cultivars according to the use of the fruit and ecological adaptation.
引用
收藏
页码:642 / 647
页数:6
相关论文
共 50 条
  • [1] Fingerprinting and genetic diversity of Olea europaea L. ssp europaea accessions from the cultivar Galega using RAPD markers
    Figueiredo, E.
    Canhoto, J.
    Ribeiro, M. M.
    SCIENTIA HORTICULTURAE, 2013, 156 : 24 - 28
  • [2] Genetic diversity in the Olive tree (Olea europaea L. subsp europaea) cultivated in Portugal revealed by RAPD and ISSR markers
    Gemas, VJV
    Almadanim, MC
    Tenreiro, R
    Martins, A
    Fevereiro, P
    GENETIC RESOURCES AND CROP EVOLUTION, 2004, 51 (05) : 501 - 511
  • [3] Genetic diversity in the Olive tree (Olea europaea L. subsp. europaea) cultivated in Portugal revealed by RAPD and ISSR markers
    V.J.V. Gemas
    M.C. Almadanim
    R. Tenreiro
    A. Martins
    P. Fevereiro
    Genetic Resources and Crop Evolution, 2004, 51 : 501 - 511
  • [4] Genetic Diversity Assessment of Trollius Accessions in China by RAPD Markers
    Li, Yong
    Ding, Wan Long
    BIOCHEMICAL GENETICS, 2010, 48 (1-2) : 34 - 43
  • [5] Genetic Diversity Assessment of Trollius Accessions in China by RAPD Markers
    Yong Li
    Wan Long Ding
    Biochemical Genetics, 2010, 48 : 34 - 43
  • [6] Assessment of genetic diversity among arecanut accessions by using RAPD markers
    Sankaran, M.
    Chandrasekar, P.
    Singh, D. R.
    Damodaran, V.
    INDIAN JOURNAL OF HORTICULTURE, 2013, 70 (03) : 428 - 430
  • [7] Assessment of genetic diversity in Costus pictus accessions based on RAPD and ISSR markers
    Ami Naik
    Pravin Prajapat
    R. Krishnamurthy
    J. M. Pathak
    3 Biotech, 2017, 7
  • [8] Assessment of genetic diversity in Costus pictus accessions based on RAPD and ISSR markers
    Naik, Ami
    Prajapat, Pravin
    Krishnamurthy, R.
    Pathak, J. M.
    3 BIOTECH, 2017, 7
  • [9] Genetic relationships in wild olives (Olea europaea ssp oleaster) by ISSR and RAPD markers
    Sesli, Meltem
    Yegenoglu, Emine Dilsat
    BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT, 2017, 31 (05) : 897 - 904
  • [10] Microsatellite markers based assessment of genetic diversity in Iranian olive (Olea europaea L.) collections
    Omrani-Sabbaghi, A.
    Shahriari, M.
    Falahati-Anbaran, M.
    Mohammadi, S. A.
    Nankali, A.
    Mardi, M.
    Ghareyazie, B.
    SCIENTIA HORTICULTURAE, 2007, 112 (04) : 439 - 447