Optimizations of the naive-Bayes classifier for the prognosis of B-Chronic Lymphocytic Leukemia incorporating flow cytometry data

被引:2
|
作者
Lakoumentas, John [1 ]
Drakos, John [1 ]
Karakantza, Marina [2 ]
Sakellaropoulos, George [1 ]
Megalooikonomou, Vasileios [3 ]
Nikiforidis, George [1 ]
机构
[1] Univ Patras, Sch Med, Dept Med Phys, GR-26504 Rion, Greece
[2] Univ Patras, Sch Med, Dept Internal Med, GR-26504 Rion, Greece
[3] Univ Patras, Polytech Sch, Comp Engn & Informat Dept, GR-26504 Rion, Greece
关键词
B-Chronic Lymphocytic Leukemia; (B-CLL); Flow cytometry; Biomedical integration; Naive-Bayes classifier; Discretization; Attribute selection; DIAGNOSIS;
D O I
10.1016/j.cmpb.2012.02.009
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Prognosis of B-Chronic Lymphocytic Leukemia (B-CLL) remains a challenging problem in medical research and practice. While the parameters obtained by flow cytometry analysis form the basis of the diagnosis of the disease, the question whether these parameters offer additional prognostic information still remains open. In this work, we attempt to provide computer-assisted support to the clinical experts of the field, by deploying a classification system for B-CLL multiparametric prognosis that combines various heterogeneous (clinical, laboratory and flow cytometry) parameters associated with the disease. For this purpose, we employ the naive-Bayes classifier and propose an algorithm that improves its performance. The algorithm discretizes the continuous classification attributes (candidate prognostic parameters) and selects the most useful subset of them to optimize the classification accuracy. Thus, in addition to the high classification accuracy achieved, the proposed approach also suggests the most informative parameters for the prognosis. The experimental results demonstrate that the inclusion of flow cytometry parameters in our system improves prognosis. (c) 2012 Elsevier Ireland Ltd. All rights reserved.
引用
收藏
页码:158 / 167
页数:10
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