BioJS']JS: an open source Java']JavaScript framework for biological data visualization

被引：59

作者：

Gomez, John ^{[1
]}

Garcia, Leyla J. ^{[1
]}

Salazar, Gustavo A. ^{[2
]}

Villaveces, Jose ^{[3
]}

Gore, Swanand ^{[1
]}

Garcia, Alexander ^{[4
]}

Martin, Maria J. ^{[1
]}

Launay, Guillaume ^{[5
]}

Alcantara, Rafael ^{[1
]}

del-Toro, Noemi ^{[1
]}

Dumousseau, Marine ^{[1
]}

Orchard, Sandra ^{[1
]}

Velankar, Sameer ^{[1
]}

Hermjakob, Henning ^{[1
]}

Zong, Chenggong ^{[6
,7
]}

Ping, Peipei ^{[6
,7
]}

Corpas, Manuel ^{[8
]}

Jimenez, Rafael C. ^{[1
]}

机构：

[1] European Bioinformat Inst, Cambridge CB10 1SD, England

[2] Univ Cape Town, Computat Biol Grp, Dept Clin Lab Sci, ZA-7925 Cape Town, South Africa

[3] Max Planck Inst Biol Ageing, D-50931 Cologne, Germany

[4] Florida State Univ, Inst Digital Informat & Sci Commun, Tallahassee, FL 32306 USA

[5] Univ Lyon 1, Inst Biol & Chim Prot, CNRS, UMR 5086,IFR Biosci Gerland Lyon Sud 128, F-69367 Lyon 07, France

[6] Univ Calif Los Angeles, David Geffen Sch Med, Cardiovasc Res Lab, Div Cardiol,Dept Physiol, Los Angeles, CA 90095 USA

[7] Univ Calif Los Angeles, David Geffen Sch Med, Cardiovasc Res Lab, Div Cardiol,Dept Med, Los Angeles, CA 90095 USA

[8] Genome Anal Ctr, Norwich NR4 7UH, Norfolk, England

来源：

BIOINFORMATICS | 2013年 / 29卷 / 08期

基金：

英国生物技术与生命科学研究理事会;

关键词：

BIOINFORMATICS;

D O I：

10.1093/bioinformatics/btt100

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

BioJS is an open-source project whose main objective is the visualization of biological data in JavaScript. BioJS provides an easy-to-use consistent framework for bioinformatics application programmers. It follows a community-driven standard specification that includes a collection of components purposely designed to require a very simple configuration and installation. In addition to the programming framework, BioJS provides a centralized repository of components available for reutilization by the bioinformatics community.

引用

页码：1103 / 1104

页数：2

共 50 条

[1] Health figures: an open source Java']JavaScript library for health data visualization
Ledesma, Andres
Al-Musawi, Mohammed
Nieminen, Hannu
[J]. BMC MEDICAL INFORMATICS AND DECISION MAKING, 2016, 16
[2] Kekule.js']js: An Open Source Java']JavaScript Chemoinformatics Toolkit
Jiang, Chen
Jin, Xi
Dong, Ying
Chen, Ming
[J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2016, 56 (06) : 1132 - 1138
[3] BioCircos.js']js: an interactive Circos Java']JavaScript library for biological data visualization on web applications
Cui, Ya
Chen, Xiaowei
Luo, Huaxia
Fan, Zhen
Luo, Jianjun
He, Shunmin
Yue, Haiyan
Zhang, Peng
Chen, Runsheng
[J]. BIOINFORMATICS, 2016, 32 (11) : 1740 - 1742
[4] Anatomy of BioJS']JS, an open source community for the life sciences
Yachdav, Guy
Goldberg, Tatyana
Wilzbach, Sebastian
Dao, David
Shih, Iris
Choudhary, Saket
Crouch, Steve
Franz, Max
Garcia, Alexander
Garcia, Leyla J.
Gruening, Bjorn A.
Inupakutika, Devasena
Sillitoe, Ian
Thanki, Anil S.
Vieira, Bruno
Villaveces, Jose M.
Schneider, Maria V.
Lewis, Suzanna
Pettifer, Steve
Rost, Burkhard
Corpas, Manuel
[J]. ELIFE, 2015, 4
[5] pileup. js']js: a Java']JavaScript library for interactive and in-browser visualization of genomic data
Vanderkam, Dan
Aksoy, B. Arman
Hodes, Isaac
Perrone, Jaclyn
Hammerbacher, Jeff
[J]. BIOINFORMATICS, 2016, 32 (15) : 2378 - 2379
[6] phylotree.js']js - a Java']JavaScript library for application development and interactive data visualization in phylogenetics
Shank, Stephen D.
Weaver, Steven
Pond, Sergei L. Kosakovsky
[J]. BMC BIOINFORMATICS, 2018, 19
[7] Health figures: an open source JavaScript library for health data visualization
Andres Ledesma
Mohammed Al-Musawi
Hannu Nieminen
[J]. BMC Medical Informatics and Decision Making, 16
[8] JS']JSOPT: A Framework for Optimization of Java']JavaScript on Web Browsers
Waqas, Muhammad
Khan, Minhaj Ahmad
[J]. MEHRAN UNIVERSITY RESEARCH JOURNAL OF ENGINEERING AND TECHNOLOGY, 2018, 37 (01) : 95 - 104
[9] JS']JSOptimizer: An Extensible Framework for Java']JavaScript Program Optimization
Liu, Yi
[J]. 2019 IEEE/ACM 41ST INTERNATIONAL CONFERENCE ON SOFTWARE ENGINEERING: COMPANION PROCEEDINGS (ICSE-COMPANION 2019), 2019, : 168 - 170
[10] Lexicon Visualization Library and Java']JavaScript for Scientific Data Visualization
Tanyalcin, Ibrahim
Al Assaf, Carla
Ferte, Julien
Ancien, Francois
Khan, Taushif
Smits, Guillaume
Rooman, Marianne
Vranken, Wim
[J]. COMPUTING IN SCIENCE & ENGINEERING, 2018, 20 (01) : 50 - 65

← 1 2 3 4 5 →