Due to the great number of genes involved in DNA repair and the interactions among the pathways responsible for the repair of different types of DNA damage, there is an increasing need for simple and reliable approaches to phenotypically assess DNA repair capacity (DRC). The use of peripheral blood mononuclear cells (PBMCs) in DRC assays is particularly useful for human monitoring studies. However, in such studies it is not always possible to collect and process samples on the same day as the blood is taken. We performed a genotype-phenotype correlation study on DRC on 225 healthy subjects. Due to the large number of blood samples to be processed, PBMCs were either isolated and cryopreserved on the same day of blood collection (day 1) or on the following day after 24 h blood storage at room temperature (day 2-RT). Samples processed in different days showed a significant difference in the DRC evaluated as 8-oxoguanine glycosylase activity (OGG assay) in cell extracts (p < 0.0001) and as benzo[a]pyrene dial epoxide (BPDE)-induced damage repair by the comet assay (p = 0.05). No apparent effect of the blood storage conditions on the outcome of gamma-ray induced H2AX phosphorylation assay was reported. These results prompted us to further analyze the effects of blood storage conditions by performing a validation study. Three blood samples were simultaneously taken from ten healthy donors, PBMCs were isolated and cryopreserved as follows: immediately after blood collection (day 1); on the following day, after blood storage at RT (day 2-RT); or after blood storage at 4 degrees C (day 2-4 degrees C). DRC was then evaluated using phenotypic assays. The gamma-ray induced H2AX phosphorylation assay has been confirmed as the only assay that showed good reproducibility independently of the blood storage conditions. The measurement of OGG assay was most affected by the blood storage conditions. (C) 2013 Elsevier B.V. All rights reserved.
机构:
Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Herman-Edelstein, Michal
Rozen-Zvi, Benaya
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Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Rozen-Zvi, Benaya
Zingerman, Boris
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Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Zingerman, Boris
Lichtenberg, Shelly
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Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Lichtenberg, Shelly
Malachi, Tsipora
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Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Malachi, Tsipora
Gafter, Uzi
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Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, Israel
Hasharon Hosp, Dept Hypertens & Nephrol, IL-49372 Petah Tiqwa, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Gafter, Uzi
Ori, Yaacov
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Rabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
Tel Aviv Univ, Sackler Sch Med, IL-69978 Tel Aviv, IsraelRabin Med Ctr, Dept Hypertens & Nephrol, Petah Tiqwa, Israel
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Li, Yingrui
Zhu, Jingde
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R China
Shanghai Jiao Tong Univ, Epigent Lab, Bio X Ctr, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Zhu, Jingde
Tian, Geng
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Chinese Acad Sci, Beijing Inst Genom, Beijing, Peoples R China
Chinese Acad Sci, Grad Univ, Beijing, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Tian, Geng
Li, Ning
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Li, Ning
Li, Qibin
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Li, Qibin
Ye, Mingzhi
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Ye, Mingzhi
Zheng, Hancheng
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Zheng, Hancheng
Yu, Jian
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Yu, Jian
Wu, Honglong
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Wu, Honglong
Sun, Jihua
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Sun, Jihua
Zhang, Hongyu
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Zhang, Hongyu
Chen, Quan
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Chen, Quan
Luo, Ruibang
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R China
S China Univ Technol, Sch Biosci & Biotechnol, Guangzhou, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Luo, Ruibang
Chen, Minfeng
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Chen, Minfeng
He, Yinghua
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
He, Yinghua
Jin, Xin
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R China
S China Univ Technol, Sch Biosci & Biotechnol, Guangzhou, Guangdong, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Jin, Xin
Zhang, Qinghui
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Zhou, Guangyu
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Sun, Jinfeng
Huang, Yebo
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Zhou, Xiaoyu
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Zhou, Xiaoyu
Guo, Shicheng
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Shanghai Jiao Tong Univ, Canc Epigenet & Gene Therapy Program, Shanghai Canc Inst, Shanghai 200030, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Guo, Shicheng
Hu, Xueda
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Li, Xin
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Chinese Acad Sci, Kunming Inst Zool, Beijing 100864, Yunnan, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Li, Xin
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Kristiansen, Karsten
Bolund, Lars
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Univ Aarhus, Inst Human Genet, Aarhus, DenmarkBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Bolund, Lars
Xu, Jiujin
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Xu, Jiujin
Wang, Wen
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Chinese Acad Sci, Kunming Inst Zool, Beijing 100864, Yunnan, Peoples R ChinaBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Wang, Wen
Yang, Huanming
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Li, Ruiqiang
Beck, Stephan
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UCL, UCL Canc Inst, London, EnglandBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Beck, Stephan
Wang, Jun
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BGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Univ Copenhagen, Dept Biol, Copenhagen, DenmarkBGI Shenzhen, Shenzhen, Guangdong, Peoples R China
Wang, Jun
Zhang, Xiuqing
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