Inheritance and alteration of genome methylation in F1 hybrid rice

被引:14
|
作者
Takamiya, Tomoko [1 ,2 ,3 ]
Hosobuchi, Saeko [1 ,2 ]
Noguchi, Tomotsugu [1 ,2 ]
Asai, Kenji [4 ]
Nakamura, Eiji [4 ]
Habu, Yoshiki [5 ]
Paterson, Andrew H. [6 ]
Iijima, Hiroshi [3 ]
Murakami, Yasufumi [2 ]
Okuizumi, Hisato [1 ]
机构
[1] NIAS, Div Genome & Biodivers Res, Tsukuba, Ibaraki 3058602, Japan
[2] Tokyo Univ Sci, Fac Ind Sci & Technol, Dept Biol Sci & Technol, Chiba, Japan
[3] Nihon Univ, Coll Pharm, Chiba, Japan
[4] Aichi Inst Technol, Fac Engn, Dept Elect & Elect Engn, Aichi, Japan
[5] NIAS, Div Plant Sci, Tsukuba, Ibaraki, Japan
[6] Univ Georgia, Plant Genome Mapping Lab, Athens, GA 30602 USA
关键词
DNA methylation; F1; hybrid; Inheritance; Oryza sativa; Restriction landmark genome scanning;
D O I
10.1002/elps.200700784
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We analyzed the inheritance of DNA methylation in the first filial generation(F1) hybrid of Oryza sativa L. ("Nipponbare" x "Kasalath") by restriction landmark genome scanning (RLGS). Most parental RLGS spots were found in the F1, but eight spots (4%) showed abnormal inheritance: seven of the eight spots were missing in the F1, and one was newly detected in the F1. Here we show demethylation at restriction enzyme sites in the F1. We also found a candidate site of stable heterozygous methylation in the genome. These results show the applicability of the RLGS method for analysis of the inheritance and alteration of methylation in F1 hybrid plants.
引用
收藏
页码:4088 / 4095
页数:8
相关论文
共 50 条
  • [1] Inheritance patterns of transcript levels in F1 hybrid mice
    Cui, Xiangqin
    Affourtit, Jason
    Shockley, Keith R.
    Woo, Yong
    Churchill, Gary A.
    GENETICS, 2006, 174 (02) : 627 - 637
  • [2] Inheritance of Trans Chromosomal Methylation patterns from Arabidopsis F1 hybrids
    Greaves, Ian K.
    Groszmann, Michael
    Wang, Aihua
    Peacock, W. James
    Dennis, Elizabeth S.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (05) : 2017 - 2022
  • [3] Inheritance of seed size by hybrid populations of pea (F1, F2)
    Davletov, Firzinat
    Gainullina, Karina
    Safin, Fidan
    INTERNATIONAL SCIENTIFIC-PRACTICAL CONFERENCE - AGRICULTURE AND FOOD SECURITY: TECHNOLOGY, INNOVATION, MARKETS, HUMAN RESOURCES (FIES 2019), 2020, 17
  • [4] Transcriptome and metabolome profiling of unheading in F1 hybrid rice
    Wang Jie
    Wei Shao-bo
    Wang Chun-Chao
    Khan, Najeeb Ullah
    Zhang Zhan-ying
    Wang Wen-sheng
    Zhao Xiu-qin
    Zhang Hong-liang
    Li Zi-chao
    Gao Yong-ming
    JOURNAL OF INTEGRATIVE AGRICULTURE, 2020, 19 (10) : 2367 - 2382
  • [5] Transcriptome and metabolome profiling of unheading in F1 hybrid rice
    WANG Jie
    WEI Shao-bo
    WANG Chun-chao
    Najeeb Ullah KHAN
    ZHANG Zhan-ying
    WANG Wen-sheng
    ZHAO Xiu-qin
    ZHANG Hong-liang
    LI Zi-chao
    GAO Yong-ming
    JournalofIntegrativeAgriculture, 2020, 19 (10) : 2367 - 2382
  • [6] INHERITANCE OF RAPDS IN F1 HYBRIDS OF CORN
    HEUN, M
    HELENTJARIS, T
    THEORETICAL AND APPLIED GENETICS, 1993, 85 (08) : 961 - 968
  • [7] Maternal inheritance of F1 hybrid morphology and colony shape in the coral genus Acropora
    Fukami, Hironobu
    Iwao, Kenji
    Kumagai, Naoki H.
    Morita, Masaya
    Isomura, Naoko
    PEERJ, 2019, 7
  • [8] Inheritance of Oryza sativa endornavirus in F1 and F2 hybrids between japonica and indica rice
    Horiuchi, H
    Moriyama, H
    Fukuhara, T
    GENES & GENETIC SYSTEMS, 2003, 78 (03) : 229 - 234
  • [9] HOMEOSTASIS AND F1 HYBRID
    BROWN, AM
    DINSLEY, M
    MACKINTOSH, JH
    NATURE, 1962, 196 (4857) : 910 - &
  • [10] Intrauterine hyperglycemia exposure results in intergenerational inheritance via DNA methylation reprogramming on F1 PGCs
    Ren, Jun
    Cheng, Yi
    Ming, Zhen-Hua
    Dong, Xin-Yan
    Zhou, Yu-Zhong
    Ding, Guo-Lian
    Pang, Hai-Yan
    Rahman, Tanzil Ur
    Akbar, Rubab
    Huang, He-Feng
    Sheng, Jian-Zhong
    EPIGENETICS & CHROMATIN, 2018, 11