Site-specific cross-linking of nucleic acids using the abasic site

被引:17
|
作者
Manoharan, M [1 ]
Andrade, LK [1 ]
Cook, PD [1 ]
机构
[1] ISIS Pharmaceut, Dept Med Chem, Carlsbad, CA 92008 USA
关键词
D O I
10.1021/ol9906209
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
[GRAPHICS] An efficient site-specific cross linking reaction between two carbohydrate residues present in two complementary DNA sequences is described. One oligodeoxynucleotide, 5'd(GGCTGA*CTGCG)3', carries an amino nucleophile tethered to the 2'-hydroxyl of an adenosine residue (A*), The target electrophile is an abasic site generated in the complementary sequence, 5'd(CGCAGDCAGCC)3' (D represents the deoxyribose). The cross-linking reaction was carried out by a reductive amination reaction in >95% yield.
引用
收藏
页码:311 / 314
页数:4
相关论文
共 50 条
  • [1] A NOVEL, SEQUENCE AND SITE-SPECIFIC CROSS-LINKING OF NUCLEIC-ACIDS INVOLVING SUGAR TO SUGAR CONNECTIVITY
    MANOHARAN, M
    JOHNSON, LK
    COOK, PD
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1993, 205 : 313 - ORGN
  • [2] Site-Specific Platinum(II) Cross-Linking in a Ribozyme Active Site
    Chapman, Erich G.
    DeRose, Victoria J.
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (01) : 256 - 262
  • [3] Site-specific cross-linking of functional proteins by transglutamination
    Kamiya, N
    Takazawa, T
    Tanaka, T
    Ueda, H
    Nagamune, T
    [J]. ENZYME AND MICROBIAL TECHNOLOGY, 2003, 33 (04) : 492 - 496
  • [4] Site-specific analysis of Abeta oligomerization using photochemical cross-linking
    Maji, S
    Bitan, G
    Vollers, SS
    Spring, S
    Condron, MM
    Teplow, DB
    [J]. NEUROBIOLOGY OF AGING, 2004, 25 : S163 - S163
  • [5] SITE-SPECIFIC RNA CROSS-LINKING WITH 4-THIOURIDINE
    SONTHEIMER, EJ
    [J]. MOLECULAR BIOLOGY REPORTS, 1994, 20 (01) : 35 - 44
  • [6] Kinetic analysis of site-specific photoaptamer-protein cross-linking
    Koch, TH
    Smith, D
    Tabacman, E
    Zichi, DA
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2004, 336 (05) : 1159 - 1173
  • [7] Site-specific cross-linking of proteins through tyrosine hexahistidine tags
    Stayner, RS
    Min, DJ
    Kiser, PF
    Stewart, RJ
    [J]. BIOCONJUGATE CHEMISTRY, 2005, 16 (06) : 1617 - 1623
  • [8] Site-specific cross-linking of collagen peptides by lysyl advanced glycation endproducts
    Kamalov, M.
    Harris, P. W. R.
    Cooper, G. J. S.
    Brimble, M. A.
    [J]. CHEMICAL COMMUNICATIONS, 2014, 50 (38) : 4944 - 4946
  • [9] EFFECT OF SITE-SPECIFIC DNA METHYLATION ON MITOMYCIN-C CROSS-LINKING
    MILLARD, JT
    BEACHY, TM
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1993, 205 : 21 - MEDI
  • [10] MEMBRANE-PERMEABILITY OF BIFUNCTIONAL, AMINO SITE-SPECIFIC, CROSS-LINKING REAGENTS
    MIYAKAWA, T
    TAKEMOTO, LJ
    FOX, CF
    [J]. JOURNAL OF SUPRAMOLECULAR STRUCTURE, 1978, 8 (03): : 303 - 310