Crystallization and preliminary crystallographic analysis of d-aspartate oxidase from porcine kidney

被引:2
|
作者
Senda, Miki [2 ]
Yamamoto, Atsushi [3 ]
Tanaka, Hiroyuki [3 ]
Ishida, Tetsuo [3 ]
Horiike, Kihachiro [3 ]
Senda, Toshiya [1 ]
机构
[1] Natl Inst Adv Ind Sci & Technol, BIRC, Koto Ku, Tokyo 1350064, Japan
[2] Japan Biol Informat Consortium JBIC, JBIC Res Inst, Struct Guided Drug Dev Project, Koto Ku, Tokyo 1350064, Japan
[3] Shiga Univ Med Sci, Dept Biochem & Mol Biol, Otsu, Shiga 5202192, Japan
关键词
d-aspartate oxidase; FAD; flavoproteins; anaerobic crystallization; AMINO-ACID OXIDASE; CRYSTAL-STRUCTURE; MECHANISM; PROTEIN;
D O I
10.1107/S1744309112013243
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
d-Aspartate oxidase (DDO) from porcine kidney was crystallized by the sitting-drop vapour-diffusion method using PEG 8000 as a precipitant. The crystal belonged to space group P21, with unit-cell parameters a = 79.38, b = 144.0, c = 80.46 angstrom, beta = 101.1 degrees, and diffracted to 1.80 angstrom resolution. Molecular-replacement trials using the structure of human d-amino-acid oxidase, which is 42% identical in sequence to DDO, as a search model provided a satisfactory solution.
引用
收藏
页码:644 / 646
页数:3
相关论文
共 50 条
  • [1] D-ASPARTATE OXIDASE OF KIDNEY
    DIXON, M
    KENWORTHY, P
    BIOCHIMICA ET BIOPHYSICA ACTA, 1967, 146 (01) : 54 - +
  • [2] D-ASPARTATE OXIDASE FROM PIG KIDNEY
    DEMARCO, C
    GRAZIANI, MT
    BOGNOLO, D
    ITALIAN JOURNAL OF BIOCHEMISTRY, 1966, 15 (06): : 402 - &
  • [3] PARTIAL PURIFICATION OF D-ASPARTATE OXIDASE FROM BEEF KIDNEY
    RINALDI, A
    DEMARCO, C
    BOLLETTINO DELLA SOCIETA ITALIANA DI BIOLOGIA SPERIMENTALE, 1969, 45 (15): : 1055 - &
  • [4] D-ASPARTATE OXIDASE FROM BEEF KIDNEY - PURIFICATION AND PROPERTIES
    NEGRI, A
    MASSEY, V
    WILLIAMS, CH
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1987, 262 (21) : 10026 - 10034
  • [5] D-ASPARTATE OXIDASE FROM BEEF KIDNEY - PURIFICATION AND PROPERTIES
    BURNS, CL
    BUCKTHAL, DJ
    HAMILTON, GA
    FEDERATION PROCEEDINGS, 1986, 45 (06) : 1618 - 1618
  • [6] THE PRIMARY STRUCTURE OF THE FLAVOPROTEIN D-ASPARTATE OXIDASE FROM BEEF KIDNEY
    NEGRI, A
    CECILIANI, F
    TEDESCHI, G
    SIMONIC, T
    RONCHI, S
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1992, 267 (17) : 11865 - 11871
  • [7] COMPETITIVE INHIBITORS OF BEEF KIDNEY D-ASPARTATE OXIDASE
    RINALDI, A
    CRIFO, C
    BOLLETTINO DELLA SOCIETA ITALIANA DI BIOLOGIA SPERIMENTALE, 1969, 45 (15): : 1058 - &
  • [8] THE KINETIC MECHANISM OF BEEF KIDNEY D-ASPARTATE OXIDASE
    NEGRI, A
    MASSEY, V
    WILLIAMS, CH
    SCHOPFER, LM
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1988, 263 (27) : 13557 - 13563
  • [9] FURTHER-STUDIES ON D-ASPARTATE OXIDASE FROM BEEF KIDNEY
    RINALDI, A
    COSSU, P
    CRIFO, C
    DEMARCO, C
    ITALIAN JOURNAL OF BIOCHEMISTRY, 1978, 27 (05): : 358 - 359
  • [10] COMPETITIVE INHIBITORS OF D-ASPARTATE OXIDASE OF HORSE KIDNEY
    RINALDI, A
    FANNI, I
    BOLLETTINO DELLA SOCIETA ITALIANA DI BIOLOGIA SPERIMENTALE, 1970, 46 (20A): : 234 - &