New cluster ensemble approach to integrative biological data analysis

被引:7
|
作者
Iam-On, Natthakan [1 ]
Boongoen, Tossapon [2 ]
Garrett, Simon [3 ]
Price, Chris [4 ]
机构
[1] Mae Fah Luang Univ, Sch Informat Technol, Chiang Rai 57100, Thailand
[2] Royal Thai AF Acad, Dept Math & Comp Sci, Bangkok 10220, Thailand
[3] Aispire Consulting Ltd, Aberystwyth SY23 3PG, Dyfed, Wales
[4] Aberystwyth Univ, Dept Comp Sci, Aberystwyth SY23 3DB, Dyfed, Wales
关键词
clustering; cluster ensembles; heterogeneous biological data; link analysis; GENE-EXPRESSION DATA; CLASS DISCOVERY; CONSENSUS; CANCER; IDENTIFICATION; ALGORITHMS;
D O I
10.1504/IJDMB.2013.055495
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Clinical data has been employed as the major factor for traditional cancer prognosis. However, this classic approach may be ineffective for analysing morphologically indistinguishable tumour subtypes. As such, microarray technology emerges as the promising alternative. Despite a large number of microarray studies, the actual clinical application of gene expression data analysis remains limited owing to the complexity of generated data and the noise level. Recently, the integrative cluster analysis of both clinical and gene expression data has been shown to be an effective alternative to overcome the above-mentioned problems. This paper presents a novel method for using cluster ensembles that is accurate for analysing heterogeneous biological data. Evaluation against real biological and benchmark data sets suggests that the quality of the proposed model is higher than many state-of-the-art cluster ensemble techniques and standard clustering algorithms.
引用
收藏
页码:150 / 168
页数:19
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