Acceleration of Early-Photon Fluorescence Molecular Tomography with Graphics Processing Units

被引:6
|
作者
Wang, Xin [1 ]
Zhang, Bin [1 ]
Cao, Xu [1 ]
Liu, Fei [1 ]
Luo, Jianwen [1 ,2 ]
Bai, Jing [1 ]
机构
[1] Tsinghua Univ, Dept Biomed Engn, Beijing 100084, Peoples R China
[2] Tsinghua Univ, Ctr Biomed Imaging Res, Beijing 100084, Peoples R China
基金
中国国家自然科学基金;
关键词
DIFFUSE OPTICAL TOMOGRAPHY; LIGHT; SIMULATION; MEDIA;
D O I
10.1155/2013/297291
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Fluorescence molecular tomography (FMT) with early-photons can improve the spatial resolution and fidelity of the reconstructed results. However, its computing scale is always large which limits its applications. In this paper, we introduced an acceleration strategy for the early-photon FMT with graphics processing units (GPUs). According to the procedure, the whole solution of FMT was divided into several modules and the time consumption for each module is studied. In this strategy, two most time consuming modules (G.. and W modules) were accelerated with GPU, respectively, while the other modules remained coded in the Matlab. Several simulation studies with a heterogeneous digital mouse atlas were performed to confirm the performance of the acceleration strategy. The results confirmed the feasibility of the strategy and showed that the processing speed was improved significantly.
引用
收藏
页数:9
相关论文
共 50 条
  • [1] Early-photon fluorescence tomography of a heterogeneous mouse model with the telegraph equation
    Zhang, Bin
    Cao, Xu
    Liu, Fei
    Liu, Xin
    Wang, Xin
    Bai, Jing
    [J]. APPLIED OPTICS, 2011, 50 (28) : 5397 - 5407
  • [2] Early-photon reflectance fluorescence molecular tomography for small animal imaging: Mathematical model and numerical experiment
    Konovalov, Alexander B.
    Vlasov, Vitaly V.
    Uglov, Alexander S.
    [J]. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING, 2021, 37 (01)
  • [3] Early-photon fluorescence tomography: spatial resolution improvements and noise stability considerations
    Leblond, Frederic
    Dehghani, Hamid
    Kepshire, Dax
    Pogue, Brian W.
    [J]. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 2009, 26 (06) : 1444 - 1457
  • [4] Early-photon guided reconstruction method for time-domain fluorescence lifetime tomography
    张琳
    蔡创坚
    吕衍路
    罗建文
    [J]. Chinese Optics Letters, 2016, 14 (07) : 89 - 93
  • [5] Early-photon guided reconstruction method for time-domain fluorescence lifetime tomography
    Zhang, Lin
    Cai, Chuangjian
    Lv, Yanlu
    Luo, Jianwen
    [J]. CHINESE OPTICS LETTERS, 2016, 14 (07)
  • [6] Fast direct reconstruction strategy of dynamic fluorescence molecular tomography using graphics processing units
    Chen, Maomao
    Zhang, Jiulou
    Cai, Chuangjian
    Gao, Yang
    Luo, Jianwen
    [J]. JOURNAL OF BIOMEDICAL OPTICS, 2016, 21 (06)
  • [7] Acceleration of optical coherence tomography signal processing by multi-graphics processing units
    Li, Xiqi
    Shi, Guohua
    Huang, Ping
    Zhang, Yudong
    [J]. JOURNAL OF INNOVATIVE OPTICAL HEALTH SCIENCES, 2014, 7 (03)
  • [9] Acceleration of Deterministic Boltzmann Solver with Graphics Processing Units
    Aristov, V. V.
    Frolova, A. A.
    Zabelok, S. A.
    Kolobov, V. I.
    Arslanbekov, R. R.
    [J]. 27TH INTERNATIONAL SYMPOSIUM ON RAREFIED GAS DYNAMICS, 2010, PTS ONE AND TWO, 2011, 1333 : 867 - +
  • [10] Acceleration of option pricing technique on graphics processing units
    Zhang, Bowen
    Oosterlee, Cornelis W.
    [J]. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE, 2014, 26 (09): : 1626 - 1639