Independent vector analysis for common subspace analysis: Application to multi -subject fMRI data yields meaningful subgroups of schizophrenia

被引:19
|
作者
Long, Qunfang [1 ]
Bhinge, Suchita [1 ]
Calhoun, Vince D. [2 ,3 ,4 ]
Adali, Tulay [1 ]
机构
[1] Univ Maryland Baltimore Cty, Dept Comp Sci & Elect Engn, Baltimore, MD 21250 USA
[2] Mind Res Network, Albuquerque, NM 87131 USA
[3] Univ New Mexico, Dept Elect & Comp Engn, Albuquerque, NM 87131 USA
[4] Emory Univ, Georgia State Univ, Triinst Ctr Translat Res Neuroimaging & Data Sci, Georgia Inst Technol, Atlanta, GA 30322 USA
基金
美国国家科学基金会;
关键词
COMPONENT ANALYSIS; SOURCE SEPARATION; NETWORK CONNECTIVITY; TEMPORAL-LOBE; FUSION; ORDER; JOINT; ICA; ABNORMALITIES; INTEGRATION;
D O I
10.1016/j.neuroimage.2020.116872
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
The extraction of common and distinct biomedical signatures among different populations allows for a more detailed study of the group-specific as well as distinct information of different populations. A number of subspace analysis algorithms have been developed and successfully applied to data fusion, however they are limited to joint analysis of only a couple of datasets. Since subspace analysis is very promising for analysis of multi-subject medical imaging data as well, we focus on this problem and propose a new method based on independent vector analysis (IVA) for common subspace extraction (IVA-CS) for multi-subject data analysis. IVA-CS leverages the strength of IVA in identification of a complete subspace structure across multiple datasets along with an efficient solution that uses only second-order statistics. We propose a subset analysis approach within IVA-CS to mitigate issues in estimation in IVA due to high dimensionality, both in terms of components estimated and the number of datasets. We introduce a scheme to determine a desirable size for the subset that is high enough to exploit the dependence across datasets and is not affected by the high dimensionality issue. We demonstrate the success of IVA-CS in extracting complex subset structures and apply the method to analysis of functional magnetic resonance imaging data from 179 subjects and show that it successfully identifies shared and complementary brain patterns from patients with schizophrenia (SZ) and healthy controls group. Two components with linked resting-state networks are identified to be unique to the SZ group providing evidence of functional dysconnectivity. IVA-CS also identifies subgroups of SZs that show significant differences in terms of their brain networks and clinical symptoms. © 2020 The Author(s)
引用
收藏
页数:14
相关论文
共 50 条
  • [1] A Scalable Approach to Independent Vector Analysis by Shared Subspace Separation for Multi-Subject fMRI Analysis
    Sun, Mingyu
    Gabrielson, Ben
    Akhonda, Mohammad Abu Baker Siddique
    Yang, Hanlu
    Laport, Francisco
    Calhoun, Vince
    Adali, Tuelay
    [J]. SENSORS, 2023, 23 (11)
  • [2] Adaptive independent vector analysis for multi-subject complex-valued fMRI data
    Kuang, Li-Dan
    Lin, Qiu-Hua
    Gong, Xiao-Feng
    Cong, Fengyu
    Calhoun, Vince D.
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2017, 281 : 49 - 63
  • [3] Estimation of common subspace order across multiple datasets: Application to multi-subject fMRI data
    Bhinge, Suchita
    Levin-Schwartz, Yuri
    Adali, Tulay
    [J]. 2017 51ST ANNUAL CONFERENCE ON INFORMATION SCIENCES AND SYSTEMS (CISS), 2017,
  • [4] INDEPENDENT SUBSPACE ANALYSIS WITH PRIOR INFORMATION FOR FMRI DATA
    Ma, Sai
    Li, Xi-Lin
    Correa, Nicolle M.
    Adali, Tuelay
    Calhoun, Vince D.
    [J]. 2010 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH, AND SIGNAL PROCESSING, 2010, : 1922 - 1925
  • [5] Independent Vector Analysis for Capturing Common Components in fMRI Group Analysis
    Engberg, Astrid M. E.
    Andersen, Kasper W.
    Morup, Morten
    Madsen, Kristoffer H.
    [J]. 2016 6TH INTERNATIONAL WORKSHOP ON PATTERN RECOGNITION IN NEUROIMAGING (PRNI), 2016, : 101 - 104
  • [6] A unified framework for group independent component analysis for multi-subject fMRI data
    Guo, Ying
    Pagnoni, Giuseppe
    [J]. NEUROIMAGE, 2008, 42 (03) : 1078 - 1093
  • [7] A study of spatial variation in fMRI brain networks via independent vector analysis: Application to schizophrenia
    Gopal, Shruti
    Miller, Robyn
    Michael, Andrew
    Adali, Tulay
    Baum, Stefi A.
    Calhoun, Vince D.
    [J]. 2014 INTERNATIONAL WORKSHOP ON PATTERN RECOGNITION IN NEUROIMAGING, 2014,
  • [8] Multivariate analysis of fMRI group data using independent vector analysis
    Lee, Jong-Hwan
    Lee, Te-Won
    Jolesz, Ferenc A.
    Yoo, Seung-Schik
    [J]. INDEPENDENT COMPONENT ANALYSIS AND SIGNAL SEPARATION, PROCEEDINGS, 2007, 4666 : 633 - +
  • [9] A critique of Tensor Probabilistic Independent Component Analysis: Implications and recommendations for multi-subject fMRI data analysis
    Helwig, Nathaniel E.
    Hong, Sungjin
    [J]. JOURNAL OF NEUROSCIENCE METHODS, 2013, 213 (02) : 263 - 273
  • [10] Spatial Variance in Resting fMRI Networks of Schizophrenia Patients: An Independent Vector Analysis
    Gopal, Shruti
    Miller, Robyn L.
    Michael, Andrew
    Adali, Tulay
    Cetin, Mustafa
    Rachakonda, Srinivas
    Bustillo, Juan R.
    Cahill, Nathan
    Baum, Stefi A.
    Calhoun, Vince D.
    [J]. SCHIZOPHRENIA BULLETIN, 2016, 42 (01) : 152 - 160