RECall for Automated Genotypic Tropism Testing

被引：3

作者：

Pou, Christian ^{[1
,2
,3
]}

Bellido, Rocio ^{[1
,2
,3
]}

Casadella, Maria ^{[1
,2
,3
]}

Puig, Teresa ^{[1
,2
,3
]}

Clotet, Bonaventura ^{[1
,2
,3
,4
]}

Harrigan, Richard ^{[5
]}

Paredes, Roger ^{[1
,2
,3
,4
]}

机构：

[1] IrsiCaixa Inst AIDS Res, Badalona, Catalonia, Spain

[2] Hosp Badalona Germans Trias & Pujol, Badalona, Catalonia, Spain

[3] Univ Autonoma Barcelona, Cerdanyola De Valles, Catalonia, Spain

[4] Fundacio Lluita SIDA, Badalona, Catalonia, Spain

[5] British Columbia Ctr Excellence HIV AIDS, Vancouver, BC, Canada

来源：

JOURNAL OF CLINICAL MICROBIOLOGY | 2013年 / 51卷 / 08期

关键词：

HIV-1; TROPISM; MARAVIROC; TRIAL; USAGE; DRUG;

D O I：

10.1128/JCM.00935-13

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

Standardization of sequence chromatogram analysis is required for consistent genotypic tropism determination across laboratories. A freely available, fast, and automated chromatogram analysis tool (RECall) provided tropism interpretations equivalent to those of manual sequence editing of 521 V3 loop HIV-1 population sequences, suggesting that RECall can be useful in standardizing genotypic tropism testing across laboratories.

引用

页码：2754 / 2757

页数：4

共 50 条

[1] The use of genotypic tropism testing and maraviroc
MacKessack-Leitch, R.
Templeton, K.
Shepherd, J.
Renwick, L.
Leen, C.
[J]. HIV MEDICINE, 2013, 14 : 26 - 27
[2] Genotypic tropism testing utilisation in a UK centre
Friday, D.
Muhammad-Fadzillah, H.
Chawla, A.
Geretti, A. M.
Goodwin, L.
[J]. HIV MEDICINE, 2013, 14 : 66 - 67
[3] Phenotypic and genotypic tropism testing: a clinical cohort
Desai, M.
Zhou, J.
Tilbury, S.
Waters, L.
Fisher, M.
[J]. HIV MEDICINE, 2011, 12 : 23 - 24
[4] The utility of genotypic tropism testing in clinical practice
Wyatt, H.
Herman, O. M.
Macartney, M.
Conibear, T.
Garcia-Diaz, A.
Booth, C.
McCormick, A.
Smith, C.
Johnson, M. A.
Irish, D.
Webster, D. P.
[J]. INTERNATIONAL JOURNAL OF STD & AIDS, 2015, 26 (08) : 593 - 594
[5] HIV population genotypic tropism testing and its clinical significance
Obermeier, Martin
Symons, Jori
Wensing, Annemarie M. J.
[J]. CURRENT OPINION IN HIV AND AIDS, 2012, 7 (05) : 470 - 477
[6] Effects of sequence alterations on results from genotypic tropism testing
Pironti, Alejandro
Sierra, Saleta
Kaiser, Rolf
Lengauer, Thomas
Pfeifer, Nico
[J]. JOURNAL OF CLINICAL VIROLOGY, 2015, 65 : 68 - 73
[7] Pitfalls of HIV genotypic tropism testing after treatment interruption
Wirden, Marc
Soulie, Cathia
Fourati, Slim
Valantin, Marc Antoine
Simon, Anne
Ktorza, Nadine
Tubiana, Roland
Bonmarchand, Manuela
Schneider, Luminita
Calvez, Vincent
Katlama, Christine
Marcelin, Anne-Genevieve
[J]. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2013, 68 (01) : 188 - 189
[8] Genotypic tropism testing: evidence-based or leap of faith?
Harrigan, P. Richard
Geretti, Anna Maria
[J]. AIDS, 2011, 25 (02) : 257 - 264
[9] Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis
Martin Däumer
Rolf Kaiser
Rolf Klein
Thomas Lengauer
Bernhard Thiele
Alexander Thielen
[J]. BMC Medical Informatics and Decision Making, 11
[10] Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis
Daeumer, Martin
Kaiser, Rolf
Klein, Rolf
Lengauer, Thomas
Thiele, Bernhard
Thielen, Alexander
[J]. BMC MEDICAL INFORMATICS AND DECISION MAKING, 2011, 11

← 1 2 3 4 5 →