Statistically correlating NMR spectra and LC-MS data to facilitate the identification of individual metabolites in metabolomics mixtures

被引:17
|
作者
Li, Xing [1 ,2 ]
Luo, Huan [1 ]
Huang, Tao [1 ,2 ]
Xu, Li [1 ,2 ]
Shi, Xiaohuo [1 ]
Hu, Kaifeng [1 ,3 ]
机构
[1] Chinese Acad Sci, Kunming Inst Bot, State Key Lab Phytochem & Plant Resources West Ch, 132 Lanhei Rd, Kunming 650201, Yunnan, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
[3] Chengdu Univ TCM, Innovat Inst Chinese Med & Pharm, Chengdu 611137, Sichuan, Peoples R China
基金
中国国家自然科学基金;
关键词
Deconvolution; LC-MS; NMR; Statistical correlation; Structure identification; SPECTROMETRY DATA; NATURAL-PRODUCTS; MASS; SPECTROSCOPY; STRATEGY;
D O I
10.1007/s00216-019-01600-z
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
NMR and LC-MS are two powerful techniques for metabolomics studies. In NMR spectra and LC-MS data collected on a series of metabolite mixtures, signals of the same individual metabolite are quantitatively correlated, based on the fact that NMR and LC-MS signals are derived from the same metabolite covary. Deconvoluting NMR spectra and LC-MS data of the mixtures through this kind of statistical correlation, NMR and LC-MS spectra of individual metabolites can be obtained as if the specific metabolite is virtually isolated from the mixture. Integrating NMR and LC-MS spectra, more abundant and orthogonal information on the same compound can significantly facilitate the identification of individual metabolites in the mixture. This strategy was demonstrated by deconvoluting 1D C-13, DEPT, HSQC, TOCSY, and LC-MS spectra acquired on 10 mixtures consisting of 6 typical metabolites with varying concentration. Based on statistical correlation analysis, NMR and LC-MS signals of individual metabolites in the mixtures can be extracted as if their spectra are acquired on the purified metabolite, which notably facilitates structure identification. Statistically correlating NMR spectra and LC-MS data (CoNaM) may represent a novel approach to identification of individual compounds in a mixture. The success of this strategy on the synthetic metabolite mixtures encourages application of the proposed strategy of CoNaM to biological samples (such as serum and cell extracts) in metabolomics studies to facilitate identification of potential biomarkers.
引用
收藏
页码:1301 / 1309
页数:9
相关论文
共 50 条
  • [1] Statistically correlating NMR spectra and LC-MS data to facilitate the identification of individual metabolites in metabolomics mixtures
    Xing Li
    Huan Luo
    Tao Huang
    Li Xu
    Xiaohuo Shi
    Kaifeng Hu
    Analytical and Bioanalytical Chemistry, 2019, 411 : 1301 - 1309
  • [2] LC-MS based metabolomics identification of natural metabolites against Fusarium oxysporum
    Yang, Wenjuan
    Tang, Sidi
    Xu, Rubing
    Zhang, Lu
    Zhou, Zihao
    Yang, Yong
    Li, Yanyan
    Xiang, Haibo
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [3] Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics
    Blazenovic, Ivana
    Kind, Tobias
    Ji, Jian
    Fiehn, Oliver
    METABOLITES, 2018, 8 (02):
  • [4] Identification of Icaritin Metabolites in Rats by LC-MS/MS
    Lin-hu Ye
    Bing-xin Xiao
    Fang-rui Cao
    Ying Zheng
    Rui-le Pan
    Qi Chang
    Chinese Herbal Medicines, 2015, 7 (04) : 296 - 302
  • [5] Identification of Icaritin Metabolites in Rats by LC-MS/MS
    Linhu Ye
    Bingxin Xiao
    Fangrui Cao
    Ying Zheng
    Ruile Pan
    Qi Chang
    Chinese Herbal Medicines, 2015, (04) : 296 - 302
  • [6] Identification of Icaritin Metabolites in Rats by LC-MS/MS
    Ye, Lin-hu
    Xiao, Bing-xin
    Cao, Fang-rui
    Zheng, Ying
    Pan, Rui-le
    Chang, Qi
    CHINESE HERBAL MEDICINES, 2015, 7 (04) : 296 - 302
  • [7] Metabolomics of the rat lens: A combined LC-MS and NMR study
    Yanshole, Vadim V.
    Snytnikova, Olga A.
    Kiryutin, Alexey S.
    Yanshole, Lyudmila V.
    Sagdeev, Renad Z.
    Tsentalovich, Yuri P.
    EXPERIMENTAL EYE RESEARCH, 2014, 125 : 71 - 78
  • [8] Metabolite identification and quantitation in LC-MS/MS-based metabolomics
    Xiao, Jun Feng
    Zhou, Bin
    Ressom, Habtom W.
    TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 2012, 32 : 1 - 14
  • [9] Algorithms and tools for the preprocessing of LC-MS metabolomics data
    Castillo, Sandra
    Gopalacharyulu, Peddinti
    Yetukuri, Laxman
    Oresic, Matej
    CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2011, 108 (01) : 23 - 32
  • [10] Filtering procedures for untargeted LC-MS metabolomics data
    Schiffman, Courtney
    Petrick, Lauren
    Perttula, Kelsi
    Yano, Yukiko
    Carlsson, Henrik
    Whitehead, Todd
    Metayer, Catherine
    Hayes, Josie
    Rappaport, Stephen
    Dudoit, Sandrine
    BMC BIOINFORMATICS, 2019, 20 (1)