Multiplexing RT-PCR for the detection of multiple miRNA species in small samples

被引:130
|
作者
Lao, KQ [1 ]
Xu, NL [1 ]
Yeung, V [1 ]
Chen, CF [1 ]
Livak, KJ [1 ]
Straus, NA [1 ]
机构
[1] Appl Biosyst Inc, Foster City, CA 94404 USA
关键词
multiplexed RT-PCR; miRNA; miRNA profiling; miRNA in small samples; multiple primer reverse transcription;
D O I
10.1016/j.bbrc.2006.02.106
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MicroRNAs are short (similar to 22 nucleotides), non-coding RNAs that play critical roles in gene regulation and may be used as rapid precise diagnostic indicators of early stages of cancer. The small size of these RNAs makes detection of multiple microRNA species in very small samples problematic. Here we investigate the parameters associated with multiplexing RT-PCR to obtain relative abundance profiles of multiple microRNAs in small sample sizes down to the amount of RNA found in a single cell. (c) 2006 Elsevier Inc. All rights reserved.
引用
收藏
页码:85 / 89
页数:5
相关论文
共 50 条
  • [1] Detection and identification of Fabavirus species by one-step RT-PCR and multiplex RT-PCR
    Panno, Stefano
    Ferriol, Inmaculada
    Rangel, Ezequiel A.
    Olmos, Antonio
    Han, Cheng-Gui
    Martinelli, Federico
    Rubio, Luis
    Davino, Salvatore
    JOURNAL OF VIROLOGICAL METHODS, 2014, 197 : 77 - 82
  • [2] Detection of Helicobacter species in gastric biopsies by RT-PCR
    AghaAmiri, K
    Ademmer, K
    Schubert, W
    Malfertheiner, P
    GUT, 1997, 41 : A81 - A81
  • [3] Improvements in the RT-PCR detection of enteric viruses in environmental samples
    Baylor Coll of Medicine, Houston, United States
    Water Sci Technol, 12 (83-86):
  • [4] Improvements in the RT-PCR detection of enteric viruses in environmental samples
    Schwab, KJ
    Neill, FH
    Estes, MK
    Atmar, RL
    WATER SCIENCE AND TECHNOLOGY, 1998, 38 (12) : 83 - 86
  • [5] APPLICATION OF RT-PCR FOR ACETOBACTER SPECIES DETECTION IN RED WINE
    Kantor, Attila
    Kacaniova, Miroslava
    Petrova, Jana
    Medo, Juraj
    Hleba, Lukas
    Rovna, Katarina
    JOURNAL OF MICROBIOLOGY BIOTECHNOLOGY AND FOOD SCIENCES, 2014, 3 : 231 - 234
  • [6] Comparison of JEV detection by IgM ELISA and rt-PCR in clinical samples
    Swami, R.
    JOURNAL OF CLINICAL VIROLOGY, 2006, 36 : S42 - S42
  • [7] Preliminary study for detection RSV genome in clinical samples by RT-PCR
    Pancer, K.
    Panasik, A.
    Gut, W.
    Litwinska, B.
    JOURNAL OF CLINICAL VIROLOGY, 2009, 46 : S22 - S22
  • [8] Multiplex standardized RT-PCR for expression analysis of many genes in small samples
    Crawford, EL
    Warner, KA
    Khuder, SA
    Zahorchak, RJ
    Willey, JC
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2002, 293 (01) : 509 - 516
  • [9] A simple nested RT-PCR method for quantitation of the relative amounts of multiple cytokine mRNAs in small tissue samples
    Kotake, S
    Schumacher, HR
    Wilder, RL
    JOURNAL OF IMMUNOLOGICAL METHODS, 1996, 199 (02) : 193 - 203
  • [10] Direct RT-PCR assay for virus detection and eriophyoid species identification
    Druciarek, T.
    Lewandowski, M.
    Tzanetakis, I. E.
    PHYTOPATHOLOGY, 2018, 108 (10) : 71 - 71