Parameter identification in ODE models with oscillatory dynamics: a Fourier regularization approach

被引:11
|
作者
D'Autilia, Maria Chiara [1 ]
Sgura, Ivonne [1 ]
Bozzini, Benedetto [2 ]
机构
[1] Univ Salento, Dipartimento Matemat & Fis E De Giorgi, Via Arnesano, I-73100 Lecce, Italy
[2] Univ Salento, Dipartimento Ingn Innovaz, Via Monteroni, I-73100 Lecce, Italy
关键词
parameter fitting; direct approach; ODE with oscillatory solutions; discrete Fourier transform; Schnackenberg model; electrodeposition; SPATIOTEMPORAL ORGANIZATION; MATHEMATICAL-MODEL; ELECTRODEPOSITION; GROWTH; CYCLE;
D O I
10.1088/1361-6420/aa9834
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
In this paper we consider a parameter identification problem (PIP) for data oscillating in time, that can be described in terms of the dynamics of some ordinary differential equation (ODE) model, resulting in an optimization problem constrained by the ODEs. In problems with this type of data structure, simple application of the direct method of control theory (discretize-thenoptimize) yields a least-squares cost function exhibiting multiple 'low' minima. Since in this situation any optimization algorithm is liable to fail in the approximation of a good solution, here we propose a Fourier regularization approach that is able to identify an iso-frequency manifold S of codimension-one in the parameter space Omega subset of R-m, such that for all parameters in S the ODE solutions have the same frequency of the assigned data. Further to the identification of S, we propose to minimize on this manifold the least squares, the phase (or time lag) and infinity norm errors between data and simulations. Hence, the Fourier-PIP can be regarded as a new constrained optimization problem, where the iso-frequency sub-manifold represents a further constraint. First we describe our approach for simulated oscillatory data obtained with the two-parameter Schnakenberg model, in the Hopf regime. Finally, we apply Fourier-PIP regularization to follow original experimental data with the morphochemical model for electrodeposition (Lacitignola et al 2015 Eur. J. Appl. Math. 26 143-73) in the case of two and three parameters
引用
收藏
页数:23
相关论文
共 50 条
  • [1] A subsystems approach for parameter estimation of ODE models of hybrid systems
    Georgoulas, Anastasis
    Clark, Allan
    Ocone, Andrea
    Gilmore, Stephen
    Sanguinetti, Guido
    [J]. ELECTRONIC PROCEEDINGS IN THEORETICAL COMPUTER SCIENCE, 2012, (92): : 30 - 41
  • [2] Parameter identification with weightless regularization
    Furukawa, T
    [J]. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN ENGINEERING, 2001, 52 (03) : 219 - 238
  • [3] Parameter identification by regularization for surface representation via the moving grid approach
    Kindermann, S
    Neubauer, A
    [J]. SIAM JOURNAL ON CONTROL AND OPTIMIZATION, 2003, 42 (04) : 1416 - 1430
  • [4] Hierarchical approach for parameter identification of multiparameter models
    Popova, Petya
    Boyadjiev, Christo
    [J]. BIOCHEMICAL ENGINEERING JOURNAL, 2008, 39 (02) : 397 - 402
  • [5] Sparsity regularization for parameter identification problems
    Jin, Bangti
    Maass, Peter
    [J]. INVERSE PROBLEMS, 2012, 28 (12)
  • [6] Parameter Identification by Iterative Constrained Regularization
    Zama, Fabiana
    [J]. 5TH INTERNATIONAL WORKSHOP ON NEW COMPUTATIONAL METHODS FOR INVERSE PROBLEMS (NCMIP2015), 2015, 657
  • [7] ODE models for oncolytic virus dynamics
    Komarova, Natalia L.
    Wodarz, Dominik
    [J]. JOURNAL OF THEORETICAL BIOLOGY, 2010, 263 (04) : 530 - 543
  • [8] A PROCEDURE FOR OSCILLATORY PARAMETER-IDENTIFICATION
    TRUDNOWSKI, DJ
    DONNELLY, MK
    HAUER, JF
    [J]. IEEE TRANSACTIONS ON POWER SYSTEMS, 1994, 9 (04) : 2049 - 2055
  • [9] A frequency domain approach for parameter identification in multibody dynamics
    Stefan Oberpeilsteiner
    Thomas Lauss
    Wolfgang Steiner
    Karin Nachbagauer
    [J]. Multibody System Dynamics, 2018, 43 : 175 - 191
  • [10] A frequency domain approach for parameter identification in multibody dynamics
    Oberpeilsteiner, Stefan
    Lauss, Thomas
    Steiner, Wolfgang
    Nachbagauer, Karin
    [J]. MULTIBODY SYSTEM DYNAMICS, 2018, 43 (02) : 175 - 191