Pelagicola litorisediminis sp nov., a novel alphaproteobacterium isolated from tidal flat sediment

被引:18
|
作者
Park, Sooyeon [1 ]
Jung, Yong-Taek [1 ,2 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon, South Korea
[2] UST, Taejon, South Korea
关键词
Pelagicola litorisediminis sp nov; Tidal flat; Novel species; Polyphasic taxonomy; GEN; NOV; FAMILY RHODOBACTERACEAE; BACTERIAL SYSTEMATICS; SEAWEED FARM; IDENTIFICATION; SEAWATER; STRAINS; KOREA; WATER; SEA;
D O I
10.1007/s10482-013-9930-4
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-negative, aerobic, non-motile and rod-shaped or ovoid bacterial strain, designated D1-W8(T), was isolated from a tidal flat on the South Sea in South Korea. Strain D1-W8(T) was found to grow optimally at 25 A degrees C, at pH 7.0-8.0 and in the presence of 2.0-3.0 % (w/v) NaCl. Neighbour-joining, maximum-likelihood and maximum-parsimony phylogenetic trees based on 16S rRNA gene sequences revealed that strain D1-W8(T) clustered with the type strain of Pelagicola litoralis showing 97.1 % sequence identity. 16S rRNA gene sequences of the type strains of other species exhibited lower similarity values. Strain D1-W8(T) was determined to contain Q-10 as the predominant ubiquinone and C-18:1 omega 7c as the predominant fatty acid. The major polar lipids of strain D1-W8(T) were identified as phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, one unidentified aminolipid and one unidentified lipid. The DNA G+C content of strain D1-W8(T) was determined to be 57.9 mol% and its DNA-DNA relatedness value with the type strain of P. litoralis was 17 %. The differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that strain D1-W8(T) is separate from P. litoralis. On the basis of the data presented, strain D1-W8(T) is considered to represent a novel species of the genus Pelagicola, for which the name Pelagicola litorisediminis sp. nov. is proposed. The type strain is D1-W8(T) (= KCTC 32327(T) = CECT 8287(T)).
引用
收藏
页码:103 / 110
页数:8
相关论文
共 50 条
  • [1] Roseovarius gaetbuli sp nov., a novel alphaproteobacterium isolated from a tidal flat sediment
    Park, Sooyeon
    Park, Ja-Min
    Kang, Chul-Hyung
    Yoon, Jung-Hoon
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2014, 105 (04): : 723 - 730
  • [2] Shewanella litorisediminis sp nov., a gammaproteobacterium isolated from a tidal flat sediment
    Lee, Mi-Hwa
    Yoon, Jung-Hoon
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2012, 102 (04): : 591 - 599
  • [3] Pelagicolalitorisediminis sp. nov., a novel alphaproteobacterium isolated from tidal flat sediment
    Sooyeon Park
    Yong-Taek Jung
    Jung-Hoon Yoon
    Antonie van Leeuwenhoek, 2013, 104 : 103 - 110
  • [4] Roseovarius gaetbuli sp. nov., a novel alphaproteobacterium isolated from a tidal flat sediment
    Sooyeon Park
    Ja-Min Park
    Chul-Hyung Kang
    Jung-Hoon Yoon
    Antonie van Leeuwenhoek, 2014, 105 : 723 - 730
  • [5] Paracoccus litorisediminis sp nov., isolated from a tidal flat
    Park, Sooyeon
    Choi, Jeehyun
    Choi, Su Jung
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (11) : 4760 - 4766
  • [6] Lutibacter litorisediminis sp nov., isolated from a tidal flat
    Park, Sooyeon
    Yoon, Sun Young
    Ha, Min-Ji
    Jung, Yong-Taek
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (03) : 583 - 588
  • [7] Pontibacter litorisediminis sp nov., isolated from a tidal flat
    Park, Sooyeon
    Park, Ji-Min
    Lee, Kang Hyun
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 4172 - 4178
  • [8] Algoriphagus litorisediminis sp nov., isolated from a tidal flat
    Park, Sooyeon
    Ha, Min-Ji
    Yoon, Sun Young
    Jung, Yong-Taek
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 5437 - 5443
  • [9] Polaribacter litorisediminis sp nov., isolated from a tidal flat
    Park, Sooyeon
    Yoon, Sun Young
    Ha, Min-Ji
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (06) : 2036 - 2042
  • [10] Maribacter litorisediminis sp nov., isolated from a tidal flat
    Park, Sooyeon
    Jung, Yong-Taek
    Won, Sung-Min
    Yoon, Jung-Hoon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 4236 - 4242