Complete genome sequence of a Watermelon silver mottle virus isolate from China

被引:22
|
作者
Rao, Xueqin [1 ]
Wu, Zhuyan [1 ]
Li, Yuan [1 ]
机构
[1] South China Agr Univ, Coll Nat Resources & Environm, Lab Plant Virol, Guangzhou 510642, Guangdong, Peoples R China
关键词
Watermelon silver mottle virus(WSMoV); Tospovirus; Watermelon; Sequence analysis; SPOTTED-WILT-VIRUS; NUCLEOTIDE-SEQUENCE; N-GENE; S-RNA; SEGMENT;
D O I
10.1007/s11262-013-0885-3
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete genome of a Watermelon silver mottle virus (WSMoV) (genus Tospovirus, family Bunyaviridae) isolate (WSMoV-GZ) from Guangdong province, China was sequenced. The genomes of WSMoV-GZ contained 3,603, 4,909, and 8,914 nt of small (S), medium (M), and large (L) RNA segments, respectively, and had a genomic organization characteristic of members of the genus Tospovirus. The amino acid sequence of the nucleocapsid (N) protein, S RNA-encoded nonstructural (NSs) protein, M RNA-encoded nonstructural (NSm) protein, Gn/Gc glycoprotein precursor, and RNA-dependent RNA polymerase (RdRp) protein showed 94.3-97.5 % identity with those of other WSMoV isolates. Phylogenetic analysis showed that the N protein of WSMoV-GZ was clustered together with those of the WSMoV isolates. The full sequence of WSMoV-GZ provides a reference genome for comparison with other tospoviruses.
引用
收藏
页码:576 / 580
页数:5
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