Dynamic flux balance analysis of whole-body metabolism for type 1 diabetes

被引:11
|
作者
Ben Guebila, Marouen [1 ]
Thiele, Ines [2 ,3 ,4 ,5 ]
机构
[1] Harvard TH Chan Sch Publ Hlth, Dept Biostat, Boston, MA USA
[2] Natl Univ Ireland, Sch Med, Galway, Ireland
[3] Natl Univ Ireland, Sch Nat Sci, Discipline Microbiol, Galway, Ireland
[4] APC Microbiome, Cork, Ireland
[5] Natl Univ Ireland, Ryan Inst, Galway, Ireland
来源
NATURE COMPUTATIONAL SCIENCE | 2021年 / 1卷 / 05期
基金
欧洲研究理事会;
关键词
INSULIN-RESISTANCE; GLUT4; GENE; EXPRESSION; MODEL; MIBEFRADIL; PHENOTYPE; CALCIUM;
D O I
10.1038/s43588-021-00074-3
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Type 1 diabetes (T1D) mellitus is a systemic disease triggered by a local autoimmune inflammatory reaction in insulin-producing cells that induce organ-wide, long-term metabolic effects. Mathematical modeling of the whole-body regulatory bihormonal system has helped to identify therapeutic interventions but is limited to a coarse-grained representation of metabolism. To extend the depiction of T1D, we developed a whole-body model of organ-specific regulation and metabolism that highlighted chronic inflammation as a hallmark of the disease, identified processes related to neurodegenerative disorders and suggested calcium channel blockers as adjuvants for diabetes control. In addition, whole-body modeling of a patient population allowed for the assessment of between-individual variability to insulin and suggested that peripheral glucose levels are degenerate biomarkers of the internal metabolic state. Taken together, the organ-resolved, dynamic modeling approach enables modeling and simulation of metabolic disease at greater levels of coverage and precision and the generation of hypothesis from a molecular level up to the population level.
引用
收藏
页码:348 / 361
页数:14
相关论文
共 50 条
  • [1] Dynamic flux balance analysis of whole-body metabolism for type 1 diabetes
    Marouen Ben Guebila
    Ines Thiele
    Nature Computational Science, 2021, 1 : 348 - 361
  • [2] EFFECTS OF INSULIN ON WHOLE-BODY AND FOREARM LEUCINE AND KIC METABOLISM IN TYPE-1 DIABETES
    TESSARI, P
    BIOLO, G
    INCHIOSTRO, S
    SACCA, L
    NOSADINI, R
    BOSCARATO, MT
    TREVISAN, R
    DEKREUTZENBERG, SV
    TIENGO, A
    AMERICAN JOURNAL OF PHYSIOLOGY, 1990, 259 (01): : E96 - E103
  • [3] Determinants of whole-body protein metabolism in subjects with and without type 2 diabetes
    Gougeon, Rejeanne
    Morais, Jose A.
    Chevalier, Stephanie
    Pereira, Sandra
    Lamarche, Marie
    Marliss, Errol B.
    DIABETES CARE, 2008, 31 (01) : 128 - 133
  • [5] Is Whole-Body Thermoregulatory Function Impaired in Type 1 Diabetes Mellitus?
    Yardley, Jane E.
    Stapleton, Jill M.
    Carter, Michael R.
    Sigal, Ronald J.
    Kenny, Glen P.
    CURRENT DIABETES REVIEWS, 2013, 9 (02) : 126 - 136
  • [6] Effects of Type 2 Diabetes and Insulin on Whole-Body, Splanchnic, and Leg Protein Metabolism
    Short, Kevin R.
    Irving, Brian A.
    Basu, Ananda
    Johnson, C. Michael
    Nair, K. Sreekumaran
    Basu, Rita
    JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 2012, 97 (12): : 4733 - 4741
  • [7] Whole-body reaching as a measure of dynamic balance in patients with stroke
    Chern, JS
    Yang, SW
    Wu, CY
    AMERICAN JOURNAL OF PHYSICAL MEDICINE & REHABILITATION, 2006, 85 (03) : 201 - 208
  • [8] Effect of Insulin With Oral Nutrients on Whole-Body Protein Metabolism in Growing Pubertal Children With Type 1 Diabetes
    Ieva Braziuniene
    Jeremy Garlick
    Izolda Mileva
    Vardhini Desikan
    Thomas A Wilson
    Margaret McNurlan
    Pediatric Research, 2009, 65 : 109 - 112
  • [9] Effect of Insulin With Oral Nutrients on Whole-Body Protein Metabolism in Growing Pubertal Children With Type 1 Diabetes
    Braziuniene, Ieva
    Garlick, Jeremy
    Mileva, Izolda
    Desikan, Vardhini
    Wilson, Thomas A.
    McNurlan, Margaret
    PEDIATRIC RESEARCH, 2009, 65 (01) : 109 - 112
  • [10] AGING + WHOLE-BODY METABOLISM
    RING, GC
    EMERIC, D
    DUPUCH, GH
    JOURNALS OF GERONTOLOGY, 1964, 19 (02): : 215 - &