Rapid and efficient room-temperature serial synchrotron crystallography using the CFEL TapeDrive

被引:14
|
作者
Zielinski, Kara A. [1 ,10 ]
Prester, Andreas [2 ]
Andaleeb, Hina [3 ,11 ]
Bui, Soi [4 ]
Yefanov, Oleksandr [1 ]
Catapano, Lucrezia [4 ,5 ]
Henkel, Alessandra [1 ]
Wiedorn, Max O. [1 ]
Lorbeer, Olga [6 ]
Crosas, Eva [6 ]
Meyer, Jan [6 ]
Mariani, Valerio [1 ,12 ]
Domaracky, Martin [1 ]
White, Thomas A. [6 ]
Fleckenstein, Holger [1 ]
Sarrou, Iosifina [1 ,13 ]
Werner, Nadine [3 ]
Betzel, Christian [3 ,7 ]
Rohde, Holger [2 ]
Aepfelbacher, Martin [2 ]
Chapman, Henry N. [1 ,7 ,8 ]
Perbandt, Markus [3 ]
Steiner, Roberto A. [4 ,9 ]
Oberthuer, Dominik [1 ]
机构
[1] Deutsch Elekt Synchrotron DESY, Ctr Free Electron Laser Sci CFEL, Notkestr 85, D-22607 Hamburg, Germany
[2] Univ Med Ctr Hamburg Eppendorf, Inst Med Microbiol Virol & Hyg, Martinistr 52, D-20246 Hamburg, Germany
[3] Univ Hamburg, Inst Biochem & Mol Biol, Lab Struct Biol Infect & Inflammat, DESY, Bldg 22a,Notkestr 85, D-22603 Hamburg, Germany
[4] Kings Coll London, Randall Ctr Cell & Mol Biophys, London, England
[5] MRC Lab Mol Biol, Francis Crick Ave, Cambridge CB2 0QH, England
[6] Deutsch Elektronen Synchrotron DESY, Notkestr 85, D-22607 Hamburg, Germany
[7] Univ Hamburg, Hamburg Ctr Ultrafast Imaging, Luruper Chaussee 149, D-22761 Hamburg, Germany
[8] Univ Hamburg, Dept Phys, Luruper Chaussee 149, D-22761 Hamburg, Germany
[9] Univ Padua, Dept Biomed Sci, Via Ugo Bassi 58-B, I-35131 Padua, Italy
[10] Cornell Univ, Sch Appl & Engn Phys, Ithaca, NY 14853 USA
[11] Bahauddin Zakariya Univ, Dept Biochem, Multan 60800, Punjab, Pakistan
[12] SLAC Natl Accelerator Lab, Linac Coherent Light Source, Menlo Pk, CA 94025 USA
[13] Wiley VCH, Berlin, Germany
来源
IUCRJ | 2022年 / 9卷
基金
英国生物技术与生命科学研究理事会; 英国科学技术设施理事会;
关键词
serial crystallography; partial reflections; protein structures; sample delivery; room temperature; CFEL TapeDrive; K. pneumoniae CTX-M-14; N. haematococca GH11 xylanase; A. flavus urate oxidase; LIPIDIC CUBIC PHASE; RADIATION-DAMAGE; MACROMOLECULAR CRYSTALLOGRAPHY; MILLISECOND CRYSTALLOGRAPHY; SAMPLE DELIVERY; REFINEMENT; PROTEINS; CRYSTALS;
D O I
10.1107/S2052252522010193
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Serial crystallography at conventional synchrotron light sources (SSX) offers the possibility to routinely collect data at room temperature using micrometre-sized crystals of biological macromolecules. However, SSX data collection is not yet as routine and currently takes significantly longer than the standard rotation series cryo-crystallography. Thus, its use for high-throughput approaches, such as fragment-based drug screening, where the possibility to measure at physiological temperatures would be a great benefit, is impaired. On the way to high-throughput SSX using a conveyor belt based sample delivery system - the CFEL TapeDrive - with three different proteins of biological relevance (Klebsiella pneumoniae CTX-M-14 beta-lactamase, Nectria haematococca xylanase GH11 and Aspergillus flavus urate oxidase), it is shown here that complete datasets can be collected in less than a minute and only minimal amounts of sample are required.
引用
收藏
页码:778 / 791
页数:14
相关论文
共 50 条
  • [1] Room-temperature macromolecular serial crystallography using synchrotron radiation
    Stellato, Francesco
    Oberthuer, Dominik
    Liang, Mengning
    Bean, Richard
    Gati, Cornelius
    Yefanov, Oleksandr
    Barty, Anton
    Burkhardt, Anja
    Fischer, Pontus
    Galli, Lorenzo
    Kirian, Richard A.
    Meyer, Jan
    Panneerselvam, Saravanan
    Yoon, Chun Hong
    Chervinskii, Fedor
    Speller, Emily
    White, Thomas A.
    Betzel, Christian
    Meents, Alke
    Chapman, Henry N.
    [J]. IUCRJ, 2014, 1 : 204 - 212
  • [2] Room-temperature serial synchrotron crystallography of Drosophila cryptochrome
    Schneps, Connor M.
    Ganguly, Abir
    Crane, Brian R.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2022, 78 : 975 - 985
  • [3] Room-temperature serial synchrotron crystallography structure of Spinacia oleracea RuBisCO
    Bjelcic, Monika
    Aurelius, Oskar
    Nan, Jie
    Neutze, Richard
    Ursby, Thomas
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2024, 80 : 117 - 124
  • [4] Room-temperature serial synchrotron crystallography of the human phosphatase PTP1B
    Sharma, Shivani
    Ebrahim, Ali
    Keedy, Daniel A.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2023, 79 : 23 - 30
  • [5] Fixed-target serial synchrotron crystallography combined with HAG method for room-temperature measurement
    Kumasaka, Takashi
    Hasegawa, Kazuya
    Baba, Seiki
    Kawamura, Takashi
    Yamashita, Keitaro
    Hirata, Kunio
    Yamamoto, Masaki
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2019, 75 : A91 - A91
  • [6] CFEL TapeDrive 2.0: a conveyor belt-based sample-delivery system for multi-dimensional serial crystallography
    Henkel, A.
    Maracke, J.
    Munke, A.
    Galchenkova, M.
    Mashhour, A. Rahmani
    Reinke, P.
    Domaracky, M.
    Fleckenstein, H.
    Hakanpaeae, J.
    Meyer, J.
    Tolstikova, A.
    Carnis, J.
    Middendorf, P.
    Gelisio, L.
    Yefanov, O.
    Chapman, H. N.
    Oberthuer, D.
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2022, 78 : E560 - E560
  • [7] New aproaches to room-temperature synchrotron data collection in macromolecular crystallography
    Aslantas, Mehmet
    Stojanoff, Vivian
    Kendi, Engin
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2008, 64 : C177 - C177
  • [8] Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons
    Weinert, Tobias
    Olieric, Natacha
    Cheng, Robert
    Bruenle, Steffen
    James, Daniel
    Ozerov, Dmitry
    Gashi, Dardan
    Vera, Laura
    Marsh, May
    Jaeger, Kathrin
    Dworkowski, Florian
    Panepucci, Ezequiel
    Basu, Shibom
    Skopintsev, Petr
    Dore, Andrew S.
    Geng, Tian
    Cooke, Robert M.
    Liang, Mengning
    Prota, Andrea E.
    Panneels, Valerie
    Nogly, Przemyslaw
    Ermler, Ulrich
    Schertler, Gebhard
    Hennig, Michael
    Steinmetz, Michel O.
    Wang, Meitian
    Standfuss, Jorg
    [J]. NATURE COMMUNICATIONS, 2017, 8
  • [9] Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons
    Tobias Weinert
    Natacha Olieric
    Robert Cheng
    Steffen Brünle
    Daniel James
    Dmitry Ozerov
    Dardan Gashi
    Laura Vera
    May Marsh
    Kathrin Jaeger
    Florian Dworkowski
    Ezequiel Panepucci
    Shibom Basu
    Petr Skopintsev
    Andrew S. Doré
    Tian Geng
    Robert M. Cooke
    Mengning Liang
    Andrea E. Prota
    Valerie Panneels
    Przemyslaw Nogly
    Ulrich Ermler
    Gebhard Schertler
    Michael Hennig
    Michel O. Steinmetz
    Meitian Wang
    Jörg Standfuss
    [J]. Nature Communications, 8
  • [10] Room Temperature Serial Crystallography at Synchrotrons
    Botha, S.
    Barends, T.
    Kabsch, W.
    Latz, B.
    Nass, K.
    Shoeman, R.
    Dworkowski, F.
    Panepucci, E.
    Wang, M.
    Schlichting, I.
    Doak, R.
    [J]. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2014, 70 : C326 - C326