Class Cariacotrichea, a novel ciliate taxon from the anoxic Cariaco Basin, Venezuela

被引:55
|
作者
Orsi, William [2 ]
Edgcomb, Virginia [3 ]
Faria, Jose [4 ]
Foissner, Wilhelm [1 ]
Fowle, William H. [2 ]
Hohmann, Tine [2 ]
Suarez, Paula [4 ]
Taylor, Craig [3 ]
Taylor, Gordon T. [5 ]
Vd'acny, Peter [6 ]
Epstein, Slava S. [2 ]
机构
[1] Salzburg Univ, Dept Organismal Biol, A-5020 Salzburg, Austria
[2] Northeastern Univ, Dept Biol, Boston, MA 02115 USA
[3] Woods Hole Oceanog Inst, Dept Geol & Geophys, Woods Hole, MA 02543 USA
[4] Univ Simon Bolivar, Dept Biol Organismos, Baruta, Estado Miranda, Venezuela
[5] SUNY Stony Brook, Marine Sci Res Ctr, Stony Brook, NY 11794 USA
[6] Comenius Univ, Dept Zool, SK-84215 Bratislava, Slovakia
基金
美国国家科学基金会;
关键词
RIBOSOMAL-RNA; DIVERSITY; INSTRUMENTATION; EUKARYOTES;
D O I
10.1099/ijs.0.034710-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The majority of environmental micro-organisms identified with the rRNA approach have never been visualized. Thus, their reliable classification and taxonomic assignment is often difficult or even impossible. In our preliminary 18S rRNA gene sequencing work from the world's largest anoxic marine environment, the Cariaco Basin (Caribbean Sea, Venezuela), we detected a ciliate clade, designated previously as CAR_H [Stoeck, S., Taylor, G. T. & Epstein, S. S. (2003). Appl Environ Microbiol 63, 5656-5663]. Here, we combine the traditional rRNA detection method of fluorescent in situ hybridization (FISH) with scanning electron microscopy (SEM) and confirm the phylogenetic separation of the CAR_H sequences from all other ciliate classes by showing an outstanding morphological feature of this group: a unique, archway-shaped kinety surrounding the oral apparatus and extending to the posterior body end in CAR_H cells. Based on this specific feature and the molecular phylogenies, we propose a novel ciliate class, Cariacotrichea nov. cl.
引用
收藏
页码:1425 / 1433
页数:9
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