Reproducibility in M&S research: issues, strategies and implications for model development environments

被引:8
|
作者
Yilmaz, Levent [1 ]
机构
[1] Auburn Univ, Shelby Ctr 3116, Samuel Ginn Coll Engn, Dept Comp Sci & Software Engn, Auburn, AL 36849 USA
关键词
computational reproducibility; reproducible research; replicability; modelling and simulation; simulation tools; BIOINFORMATICS;
D O I
10.1080/0952813X.2012.693842
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
As the use of computer simulation is increasingly becoming central to scientific enterprise, lack of proper documentation, validation and distribution of models and experiments may hamper reproducibility and hence cause a credibility gap. Building on prior research requires ability to reproduce simulation experiments and to further extend models to address increasingly challenging problems. In this article, we delineate three dimensions of reproducible research. For each dimension, issues, strategies and implications for simulation model development are identified. From a technical infrastructure point of view, we introduce the e-Portfolio concept, which is an ensemble of integrated active documents that interweave published manuscript, computer code, data and scientific workflow specification. From the process point of view, strategies and potential mechanisms are delineated to enable authors, publishers, funding agencies, journals and the broader scientific community to cooperate and establish a sustained model base, simulations, experiments and documentation, so that scientists can build on each other's work and achievements.
引用
收藏
页码:457 / 474
页数:18
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